Gene Coch_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1863 
Symbol 
ID8368311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2229755 
End bp2230744 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content43% 
IMG OID644984305 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_003141969 
Protein GI256820690 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTAG CAGTAGTAGG CGTTACCGGA ATGGTAGGTA ACGTGATGTT AGAAGTACTT 
GCAGAACACA AATTTCCTGT AACCGAATTA ATTCCCGTAG CATCAGAGAA GTCAGTAGGG 
AAGAAAATTA CTTTTCAAGG AACTGAATAT ACTGTGATAG GCTTACAACA AGCCGTATCG 
CTCAAACCCG ATTTAGCTCT TTTTTCAGCA GGAGCTACCG TCTCTAAAGA ATGGGCACCT 
AAGTTTGCCC AAGTAGGGAC AACAGTGGTA GATAACTCAT CGGCGTGGCG TATGGAGGAC 
ACTAAAAAGT TGGTAATTCC TGAAATCAAT GCCGATGTGC TTACGAAAGA CGATAAGATT 
ATTGCAAACC CTAATTGTTC TACGATACAG ATGCTCGTAG CTTTAGCTCC TTTACAAAAG 
AAATACGGTA TCAAGCGTGT GGTAGTCTCT ACTTACCAGT CGATTACAGG TACAGGAGTG 
AAAGCCGTAC GTCAGTTAGA AAACGAATAC AAGGGAGAAA AAGGCGAGAT GGCTTATCAC 
TACCAAATAC ACCGCAATGC GATTCCTCAT TGTGACGTGT TTGAGGACAA TGGTTATACC 
AAGGAAGAAA TGAAATTGGT GCGTGAAACT AAAAAGATAC TCCGAGACGA CAGTATTGCA 
GTAACGGCTA CAGCCGTGCG CATACCAGTA GTAGGTGGAC ATAGCGAAGC GGTGAATGTA 
GAATTGAAAA AGGATTTTAA TATTGATGAA GTGCGTATAC TCTTAGCACA ATCACCTGGA 
ATTAAGGTGC AGGATAATAC TGATACGAAT ACTTACCCTA TGCCACTGTA CGCTCACGGC 
AAAGATGACG TATTTGTAGG ACGTATCCGT CGCGATGAGT CGCAACCTAA TACTCTTAAC 
TTATGGGTAG TAGCTGATAA CCTGCGCAAA GGAGCTGCTA CTAATACCAT ACAGATTGCT 
GAGTATCTCA TCGCACATAA ACTGTTGTAG
 
Protein sequence
MRVAVVGVTG MVGNVMLEVL AEHKFPVTEL IPVASEKSVG KKITFQGTEY TVIGLQQAVS 
LKPDLALFSA GATVSKEWAP KFAQVGTTVV DNSSAWRMED TKKLVIPEIN ADVLTKDDKI 
IANPNCSTIQ MLVALAPLQK KYGIKRVVVS TYQSITGTGV KAVRQLENEY KGEKGEMAYH 
YQIHRNAIPH CDVFEDNGYT KEEMKLVRET KKILRDDSIA VTATAVRIPV VGGHSEAVNV 
ELKKDFNIDE VRILLAQSPG IKVQDNTDTN TYPMPLYAHG KDDVFVGRIR RDESQPNTLN 
LWVVADNLRK GAATNTIQIA EYLIAHKLL