| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1854 |
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| Symbol | |
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| ID | 8368302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2217005 |
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| End bp | 2218135 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644984296 |
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| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
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| Protein accession | YP_003141960 |
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| Protein GI | 256820681 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACGAC TCAATTTTAT CGCATTGCTT TCTGCAATGT TTGTATTTTT CAGTTGCAAT
TCGCAAAAGA AAGCCTATAA AGATTTAGGC GATGGCTTAT TTGCGGATAT TGAAACTACT
CAAGGAAATA TTATTGTAAA ACTAAACTAC AAAGAAACTC CTGTAACAGT AGCCAACTTT
GTTACTTTGG CAGAAGGTAA AAACACTTTT GTAAAAGCTG AATACAAAGG TAAACCATTT
TACAACGGAA CAATTTTCCA CCGAGTAATC AAGGATTTTA TGATACAAGG AGGTGACCCT
ACCGGCACCG GAATGGGAGA ACCCGGTTAT CGATTTGAAG ATGAGATAGT GCCTACTTTA
AGACACGATA AAAAAGGAAC CTTGTCAATG GCAAACGCAG GACCAGCTAC CAATGGCAGT
CAGTTTTTTA TTACCCAAGT GCCTACTCCT CATTTAGATG GTCGCCACAC AGTATTCGGC
GAAACGGTGA AAGGTTTAGA AGTAATAGAT GCTATTGCTA ATACTAAAAC AGTAATGAAC
GACAAGCCTG AAAAGGATAT CAAAATCAAT AAGATTACTA TTATTGCTAA TGGTAAAGAT
GCTAAAAGTT TCAATGCTGT AAAAGTTTTT GAAGATTACT TCAAAGAAAT TAACAAGAGA
GAGCGAGAAA AAGAAGCTAA GACGAAAGCC GCTGCAGCTA AGTTCTTAGA AGAAGTAAAA
GTACAGGAAC CACAAGCTAA AGCACTTCCT TCAGGAGTAA AAATCTTTAA GTTAGTTGAT
GGCAAAGGCA AACAACCTAA TCACACACAT CAAGTAATGG TAAACTACGC AGGTTATTTG
AAAAACGGAA CCCTTTTCGA TTCTAACGTA AAAGAAATTG AAGAGGCTTA CGGTAAGTAC
AACTCATTAC GTGAACAACA AGGAGGATAC CAAGCCTTCC CTATGCCTTA TAACACTTCT
GCGCAACTTA TACCAGGTTT CAGAGATGCT TTGCTTACAA TGAAAGTAGG TGATAAAATA
CGCGTATTTA TTCCTGCTGC TTTAGGATAT GGCGAAAGAG GTGCTGGCGA TGTGATTCCA
CCTAATAGCG ACCTTATTTT CGATATTGAA ATTACAGATA TAGCTAAATA A
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| Protein sequence | MRRLNFIALL SAMFVFFSCN SQKKAYKDLG DGLFADIETT QGNIIVKLNY KETPVTVANF
VTLAEGKNTF VKAEYKGKPF YNGTIFHRVI KDFMIQGGDP TGTGMGEPGY RFEDEIVPTL
RHDKKGTLSM ANAGPATNGS QFFITQVPTP HLDGRHTVFG ETVKGLEVID AIANTKTVMN
DKPEKDIKIN KITIIANGKD AKSFNAVKVF EDYFKEINKR EREKEAKTKA AAAKFLEEVK
VQEPQAKALP SGVKIFKLVD GKGKQPNHTH QVMVNYAGYL KNGTLFDSNV KEIEEAYGKY
NSLREQQGGY QAFPMPYNTS AQLIPGFRDA LLTMKVGDKI RVFIPAALGY GERGAGDVIP
PNSDLIFDIE ITDIAK
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