Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1851 |
Symbol | |
ID | 8368299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2214214 |
End bp | 2215221 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644984293 |
Product | Aldose 1-epimerase |
Protein accession | YP_003141957 |
Protein GI | 256820678 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG AATATCATAA AGAAAAATTA CAAACTATTG TACTTTCTAA TAAGGGAGGT ATGGAAGTAA CTGTACTTAA TTTTGGTGGT GTGATTAGCT CTATTAAAGT GCCTATAAAG GGGAAAAAAG TAGAGTGTGT ATTGGGATTC GACACGTTTG AAGAGTACGT AAGTGAGGCT TACCGCAAAG AGTATCCGTA TCTTGGTGCG ATTATAGGGC GTAACGCAGG TCGTATAAAG TACGGAAAAG TTATTATCGA TGGCAAGGAA GTACAATTGA ACTGCAATTT AGGAGAAAAT CAAATACACG GAGGCTCAGT AGGCTTTGAT AGTGTCTTTT GGGACGTAGT GGCAGTAAAT AGGGGAGATG ATAATTCTTC AGTAACCTTA CAATATGTTT CTAAAGATGG CGAAGAGGGT TACCCAGGTG AGGTAACGGT GCGTGTAACC TATACGCTTA CTTCCGATAA CTGTTTGCGC ATTGATTATC ACGGCACCAC CGATGCACCT ACTATTTTAA ATCTCACTCA GCATACGTAT TTTAACCTCA ATGAAAGCAA TACCGATGTG CTTAACAATA CCTTACAAAT AAAAGCCGAT AAGTACGTAC CGTTAGAAGA AGGGTTCTTT ACCCCTACAG GTGAACGCCC TCCTGTGGCT GGCACACGTT TGGATTACCG AAAAGGGCAA AAGGTATATG CTCATACTGA TAACTCTTTT GTACGTGAGA TTACCCCTGA GGAAGTAATG GCTACACTTA CTAACGGAGA AGGTTCATTG GCAATGGAAG TGCGTACTAA TCACCCTGTG TTGCATATCT ATGCAGGATA TTATTTACCT GAGTTGCAAC CACCTCATCG CAAAACTATA GGGCAAAGCA GAGGGATTTG TTTTGAAGCA CAAGGTTATG CCGATGCTAC TAAACATCCA CAGTTCGATA ATGTAGTGTT AAGACCTAAA GAAGAATACA ATTTCTTTAC TGAATTTAAG TTTATGCACC TTTCGTAG
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Protein sequence | MKKEYHKEKL QTIVLSNKGG MEVTVLNFGG VISSIKVPIK GKKVECVLGF DTFEEYVSEA YRKEYPYLGA IIGRNAGRIK YGKVIIDGKE VQLNCNLGEN QIHGGSVGFD SVFWDVVAVN RGDDNSSVTL QYVSKDGEEG YPGEVTVRVT YTLTSDNCLR IDYHGTTDAP TILNLTQHTY FNLNESNTDV LNNTLQIKAD KYVPLEEGFF TPTGERPPVA GTRLDYRKGQ KVYAHTDNSF VREITPEEVM ATLTNGEGSL AMEVRTNHPV LHIYAGYYLP ELQPPHRKTI GQSRGICFEA QGYADATKHP QFDNVVLRPK EEYNFFTEFK FMHLS
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