Gene Coch_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1851 
Symbol 
ID8368299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2214214 
End bp2215221 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content40% 
IMG OID644984293 
ProductAldose 1-epimerase 
Protein accessionYP_003141957 
Protein GI256820678 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AATATCATAA AGAAAAATTA CAAACTATTG TACTTTCTAA TAAGGGAGGT 
ATGGAAGTAA CTGTACTTAA TTTTGGTGGT GTGATTAGCT CTATTAAAGT GCCTATAAAG
GGGAAAAAAG TAGAGTGTGT ATTGGGATTC GACACGTTTG AAGAGTACGT AAGTGAGGCT
TACCGCAAAG AGTATCCGTA TCTTGGTGCG ATTATAGGGC GTAACGCAGG TCGTATAAAG
TACGGAAAAG TTATTATCGA TGGCAAGGAA GTACAATTGA ACTGCAATTT AGGAGAAAAT
CAAATACACG GAGGCTCAGT AGGCTTTGAT AGTGTCTTTT GGGACGTAGT GGCAGTAAAT
AGGGGAGATG ATAATTCTTC AGTAACCTTA CAATATGTTT CTAAAGATGG CGAAGAGGGT
TACCCAGGTG AGGTAACGGT GCGTGTAACC TATACGCTTA CTTCCGATAA CTGTTTGCGC
ATTGATTATC ACGGCACCAC CGATGCACCT ACTATTTTAA ATCTCACTCA GCATACGTAT
TTTAACCTCA ATGAAAGCAA TACCGATGTG CTTAACAATA CCTTACAAAT AAAAGCCGAT
AAGTACGTAC CGTTAGAAGA AGGGTTCTTT ACCCCTACAG GTGAACGCCC TCCTGTGGCT
GGCACACGTT TGGATTACCG AAAAGGGCAA AAGGTATATG CTCATACTGA TAACTCTTTT
GTACGTGAGA TTACCCCTGA GGAAGTAATG GCTACACTTA CTAACGGAGA AGGTTCATTG
GCAATGGAAG TGCGTACTAA TCACCCTGTG TTGCATATCT ATGCAGGATA TTATTTACCT
GAGTTGCAAC CACCTCATCG CAAAACTATA GGGCAAAGCA GAGGGATTTG TTTTGAAGCA
CAAGGTTATG CCGATGCTAC TAAACATCCA CAGTTCGATA ATGTAGTGTT AAGACCTAAA
GAAGAATACA ATTTCTTTAC TGAATTTAAG TTTATGCACC TTTCGTAG
 
Protein sequence
MKKEYHKEKL QTIVLSNKGG MEVTVLNFGG VISSIKVPIK GKKVECVLGF DTFEEYVSEA 
YRKEYPYLGA IIGRNAGRIK YGKVIIDGKE VQLNCNLGEN QIHGGSVGFD SVFWDVVAVN
RGDDNSSVTL QYVSKDGEEG YPGEVTVRVT YTLTSDNCLR IDYHGTTDAP TILNLTQHTY
FNLNESNTDV LNNTLQIKAD KYVPLEEGFF TPTGERPPVA GTRLDYRKGQ KVYAHTDNSF
VREITPEEVM ATLTNGEGSL AMEVRTNHPV LHIYAGYYLP ELQPPHRKTI GQSRGICFEA
QGYADATKHP QFDNVVLRPK EEYNFFTEFK FMHLS