Gene Coch_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1850 
Symbol 
ID8368298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2213148 
End bp2214131 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content38% 
IMG OID644984292 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_003141956 
Protein GI256820677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAC CTAACACTTT TAACCTTAAA GTTCAAGCTG AAAAATATAT TCCTATCCAT 
AGTGAAAAGG AACTCATCAG TGCGTTACAA GAGTATCACA ATCCATTTGT TTTAGGGGGT 
GGAAGCAATA TGCTTCTCAC TAAAAATATT ACGCAACCTG TGTTTCACAT TTTGCTTAAA 
GGCATTAGCA CTGTAAAAGA AACTGATGAA TACATATGGC TTAAAGCACA AGCAGGAGAG 
AATTGGCACC AATTTGTGCG TTATACTTTA CAACAGGGCT ATGGTGGACT TGAAAATCTT 
TCGCTGATCT ACGGCAATGT AGGTACTACT CCTGTACAGA ACATAGGGGC TTATGGGGTG 
GAAATAAAAG ATGTGATGGA GAGTTGTGAG ACTATTGAGA TTCATACACT GCAAAAACGC 
ATATTTACAA ATGCAGAATG TGCTTTTGCT TATCGAGAAT CTATTTTTAA GGGGAAAGAG 
AAGGGCAATT ACATCATTAC TTCGGTTACT TTTAAACTTA CTAAAAAGAA CCACCAATTG 
CATACGCAAT ACGGAGCTAT TCAGCAAGTC CTTTCAGAGC GAGGAATTAC TAAACCTACC 
CCCGAAGAGT TGTCCGATGC GATTATAACC ATTCGCGAAA GTAAATTGCC TAACCCTAAT 
GTTTTGGGTA ATTGTGGCAG TTTCTTTAAA AACCCAATTG TTCTAAAAAC TGATTACGAA 
AAGCTACAAC AGCAATATCC TGAAATTCCT TGTTATCCAG TGAATGAAAC CGAAGTGAAA 
GTGCCAGCAG GTTGGCTTAT AGATCGCTCA GGACTCAAAG GTTATCGGAA AGGAGATGCA 
GGAGTGCACA AGCATCAAGC ATTGGTATTG GTGAATTATG GTGAAGCTAC GGGTGAGGAA 
ATTTTAGCGG TGGCTAATTA CGTAAAAACT CAAGTGCGAG AAAAGTTTGG TATTGCCTTA 
GAGTTTGAAG TGAATATATT TTAA
 
Protein sequence
MQIPNTFNLK VQAEKYIPIH SEKELISALQ EYHNPFVLGG GSNMLLTKNI TQPVFHILLK 
GISTVKETDE YIWLKAQAGE NWHQFVRYTL QQGYGGLENL SLIYGNVGTT PVQNIGAYGV 
EIKDVMESCE TIEIHTLQKR IFTNAECAFA YRESIFKGKE KGNYIITSVT FKLTKKNHQL 
HTQYGAIQQV LSERGITKPT PEELSDAIIT IRESKLPNPN VLGNCGSFFK NPIVLKTDYE 
KLQQQYPEIP CYPVNETEVK VPAGWLIDRS GLKGYRKGDA GVHKHQALVL VNYGEATGEE 
ILAVANYVKT QVREKFGIAL EFEVNIF