Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1844 |
Symbol | |
ID | 8368292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2205739 |
End bp | 2206704 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644984286 |
Product | Polyprenyl synthetase |
Protein accession | YP_003141950 |
Protein GI | 256820671 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCGA TTGAAGAGTA TAAAACAGCT TTTTTACAGC ATATAGAAAA AATTTTTACT CCCAAAGAGC CTATTCACCT CTATGAACCT ATTCAGTACA TTCTTAACTT AGGAGGAAAG CGTATTCGTC CTTTACTTAC TCTTATTGCA ACCGATATTT TTGGTAAAGA CTATTGCAAA GCACTTAATG CAGCTACTGC CATAGAGGTT TTTCACAACT TTTCACTTAT TCACGACGAT ATTATGGATA ATGCTTCTCT AAGACGTGGC AAACCTACTG TTCATCAAAA ATGGGATACA AATGTAGGTA TACTTTCGGG AGATGCTATG CTTATCATTG CCTATAAATT ATTAGAGGAT TATCCTTCAG AAATATTTCA AGAATTAGTA AAAACATTAA GTGAAACAGC TCTTAAAGTA TGTGAAGGAC AGCAAATGGA TATGGATTTT GAAAAACTAC AAGAGGTAAG TATTGAGGCA TATATGCAAA TGATTTCATA CAAAACTTCA GTTCTTATAG GAGCTGCCTT ACAAATGGGT AGTATTATCT CTGAAACTAC TAAGGAAAAC CAAATGAATA TGTACAATTT TGGTTTAAAT TTAGGAATAG CTTTTCAGTT ACAAGATGAT TATTTGGATA CTTTTGGAGA TGCTTCATTT GGTAAAAAAA TAGGAGGTGA TATTATAGAG AATAAGAAAA CTATACTCTA TTTAAAATCT TTAGCACTAA GCAATGAAAA ACAACGTGAA GAACTATTGA GAGCATATGC TTTAAATGAA GTTGATAATA AAATAGCAAG AGTAAGAGAG ATTTTTCAGA TAACAAATGC GGACAAAGCA GTTCGCCAAC TGATAGAAAA TTATACTCAA AAAGCTCTTA TGATATTAGA GAAAATAACT ATAGGAGATG ATAAACGAGA ATACCTCAGA ACTTTTGCCC TACAATTAAT GGATAGAAAA ATATAA
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Protein sequence | MLSIEEYKTA FLQHIEKIFT PKEPIHLYEP IQYILNLGGK RIRPLLTLIA TDIFGKDYCK ALNAATAIEV FHNFSLIHDD IMDNASLRRG KPTVHQKWDT NVGILSGDAM LIIAYKLLED YPSEIFQELV KTLSETALKV CEGQQMDMDF EKLQEVSIEA YMQMISYKTS VLIGAALQMG SIISETTKEN QMNMYNFGLN LGIAFQLQDD YLDTFGDASF GKKIGGDIIE NKKTILYLKS LALSNEKQRE ELLRAYALNE VDNKIARVRE IFQITNADKA VRQLIENYTQ KALMILEKIT IGDDKREYLR TFALQLMDRK I
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