| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1841 |
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| Symbol | |
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| ID | 8368289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2200887 |
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| End bp | 2201627 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984283 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_003141947 |
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| Protein GI | 256820668 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.110015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATGC AATTATTTTT CCACTCCAGC CTTCATTCAA GTAGCACAAA TTGCTTTTTT
GATAAGGAAG AAAGCCAACA TATAGTAAAG GTACTGCGCA AAAAAGCAGG CGATATACTC
CATATTACCA ATGGTAAAGG ACTTCTTTTT GAAGCAAAAT TAGACTTCGC TACACCTAAA
CAATGTGAGG TGTCTATACT GAAATGTACT CTCCAGCTTC CCCGTCCTTA CTACTTACAT
TTGGTGGTAG CACCTACCAA GATGAATGAA CGTTATGAGT GGTTTTTGGA GAAAGCCACC
GAAATAGGCG TTGATGAAAT TACTCCTATT ATCTGTGAAC ATTCTGAGCG TACCACTATC
AAAGTAGAAC GTTTTGAAAA GATACTCCTT TCAGCAATGA AACAATCGTT GCAATGCTAT
TTGCCTAAAC TGAATGCACC TATTGCATCA GCTCAGTTTT TCAAAACGAT GCTGACAGAT
AGTTCAGCTA AATATATAGC TCACTGTCAA GAAAATGAAA AACGCTTGCT CTCTCGCGCA
CTCAAGTCCT TTCCTGAGCG TATTATCGTG CTTATAGGTC CTGAAGGCGA TTTCTCTACT
AATGAGATAA ACACCGCTTT GCAACAAGCA TTTGTGCCTA TCTCATTAGG AGATACTCGC
TTACGCACCG AAACAGCAGC CATAGTAGCC TGTCATACCG TTGCGGTAAT AAATGAACGG
ACTAACATTA GTTCAACTTA A
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| Protein sequence | MSMQLFFHSS LHSSSTNCFF DKEESQHIVK VLRKKAGDIL HITNGKGLLF EAKLDFATPK
QCEVSILKCT LQLPRPYYLH LVVAPTKMNE RYEWFLEKAT EIGVDEITPI ICEHSERTTI
KVERFEKILL SAMKQSLQCY LPKLNAPIAS AQFFKTMLTD SSAKYIAHCQ ENEKRLLSRA
LKSFPERIIV LIGPEGDFST NEINTALQQA FVPISLGDTR LRTETAAIVA CHTVAVINER
TNISST
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