Gene Coch_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1823 
Symbol 
ID8368271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2177036 
End bp2178937 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content41% 
IMG OID644984265 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003141929 
Protein GI256820650 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.272231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC ATCTTATTAT TTTAGCTTCG GTTATGGCAT TCAATAGCAT ACAAGCACAA 
CAACCTCTCA CCCCCGAAAA ACTATGGGAA CTACATCGCG TGAATGGTAT AGGTATTACT
CCCGACCAGC AATATGTATT GGTGAGTGTG AGTACTCCAA ATATAAAGGA AAATACTTTT
AACAAAGAAT ACTATAAACT TGCCGTAAAA GGAGGTGTAC CCATTCCTAT AAGCAAAGAA
GAGGTAGAAA AGCTCACGGC TAAATACAAT ACCGATAAAA GCCTAAAACT CACTCATAAG
GAAGTAAAAT TAAAGTCGGT TTTAGGGAAA GACTTCTATA CTGACTTAGA AAAATCATCG
GGGAAGCTGT ACAGTAGCTT AGACCACCGC CATTGGGACA CGTGGAATGA AGGCAGTTAC
AATCACGTGA TGATAGAAGA TAGTAATGGT AAGCAAACCG ATATAATGGA AGGACTGCCC
TATTACTGTC CGCAGTTGCC TTTTGGAGGT GATGAGGATT ATATATGGAG TCTAGACGGT
AAAAAGGTAC TTTATGTTAC AAAAGCCAAA GTAGGCACTG ATTATGTACT GAGCACTAAT
ACTGATATCT ATGAGTACGA CCTCACCTCG AAAAAAACAA CAAACCTCAC CGAAGGAATG
ATGGGGTATG ACACTAACCC TCAGTATAAC AAAGAAGGCG TACTTGCGTG GCTCAGTATG
GCACACGACG GTAATGAAGC TGATAAAAAC GATCTTTATA TATTGAAGGA CGGCAAGCGC
ATTAACCTTA CAGCTAACTG GGATAATACT ATTTTCAGTT ACCGATGGAG CAATGATGGG
AAGCAAATAT ACCTAATTGC GGCTACCCAA GGAACAGAGC AAGTATTTGT AGTAGCTCCT
TTTAGTAAAG ATACCACTCC AAGACAACTC ACACAAGGCG TATTTGATGT GAATAGTATA
GTAGGACAAG CAGGCGACCA ATTGGTTGTG ATGCGCACGG ATATGAACCA CGCAGCTGAA
CTGTATACTA TCAACTTAAA AGAGAAAAAA GGACGCATAA CACTATCACA GCTTTCACAT
TTTAATGATG AGCTATACAA AGGGATTGCT GAATGTCCTA TTAAGGAGCG TATCATCAAA
ACTACTGACG GCAAGAGAAT GCACGCTTGG GTAATTTACC CACCGAACTT TGACCCTAAC
AAGAAGTACC CTACCCTACT CTACTGCCAA GGAGGACCAC AATCTGTTGT GAGCCAATTT
TACAGTTTCC GTTGGAACTT CCAAGTAATG GCTTCACAAG GTTATATAGT GATAGCTCCC
AACCGCAGAG GATTACCAGG CTTTGGGGTA GAATGGAATG CAGAAATCAG TGGAGATTGG
GGTGGACAGC CTATGCGCGA TTATCTATCG GCTATTGATG ATATTGCTAA GGAACCTTAT
GTAGACAAAG ACCGATTAGG AGCCATTGGT GCCAGCTACG GAGGATATTC AATCTACTAC
TTAGCAGGTA TTCACCAAAA ACGTTTCAAG ACGTTTATTG CCCATTGCGG AGTATTTAAC
TTACAAAGTA TGTATGGCAC TACCGAAGAG CTTTTCTTCA ACAATAACGA AATAGGAGGT
GCTTATTGGG ATAAAAAGAA CGCTGTAGCG CAAAAATCGT ATAAAGAGTT TAATCCTATA
GAGAAGATTA CAGAATGGGA CACCCCTATT CTCATCATTC ACGGAGGGAA AGACTACCGA
GTACCCGAAG AACAGGGATT CCAAGCTTTT ACAGCAGCTC AACTGAGAGG CATCAAAAGT
GAGTTACTTT ATTTTCCTGA TGAGAACCAC TGGGTATTAC AACCTCAGAA TGGACTCTTA
TGGCAGAGAA CATTCTTCAA ATGGCTAAAA GAAACATTAT AA
 
Protein sequence
MKKHLIILAS VMAFNSIQAQ QPLTPEKLWE LHRVNGIGIT PDQQYVLVSV STPNIKENTF 
NKEYYKLAVK GGVPIPISKE EVEKLTAKYN TDKSLKLTHK EVKLKSVLGK DFYTDLEKSS
GKLYSSLDHR HWDTWNEGSY NHVMIEDSNG KQTDIMEGLP YYCPQLPFGG DEDYIWSLDG
KKVLYVTKAK VGTDYVLSTN TDIYEYDLTS KKTTNLTEGM MGYDTNPQYN KEGVLAWLSM
AHDGNEADKN DLYILKDGKR INLTANWDNT IFSYRWSNDG KQIYLIAATQ GTEQVFVVAP
FSKDTTPRQL TQGVFDVNSI VGQAGDQLVV MRTDMNHAAE LYTINLKEKK GRITLSQLSH
FNDELYKGIA ECPIKERIIK TTDGKRMHAW VIYPPNFDPN KKYPTLLYCQ GGPQSVVSQF
YSFRWNFQVM ASQGYIVIAP NRRGLPGFGV EWNAEISGDW GGQPMRDYLS AIDDIAKEPY
VDKDRLGAIG ASYGGYSIYY LAGIHQKRFK TFIAHCGVFN LQSMYGTTEE LFFNNNEIGG
AYWDKKNAVA QKSYKEFNPI EKITEWDTPI LIIHGGKDYR VPEEQGFQAF TAAQLRGIKS
ELLYFPDENH WVLQPQNGLL WQRTFFKWLK ETL