Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1823 |
Symbol | |
ID | 8368271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2177036 |
End bp | 2178937 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644984265 |
Product | peptidase S9 prolyl oligopeptidase active site domain protein |
Protein accession | YP_003141929 |
Protein GI | 256820650 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.272231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC ATCTTATTAT TTTAGCTTCG GTTATGGCAT TCAATAGCAT ACAAGCACAA CAACCTCTCA CCCCCGAAAA ACTATGGGAA CTACATCGCG TGAATGGTAT AGGTATTACT CCCGACCAGC AATATGTATT GGTGAGTGTG AGTACTCCAA ATATAAAGGA AAATACTTTT AACAAAGAAT ACTATAAACT TGCCGTAAAA GGAGGTGTAC CCATTCCTAT AAGCAAAGAA GAGGTAGAAA AGCTCACGGC TAAATACAAT ACCGATAAAA GCCTAAAACT CACTCATAAG GAAGTAAAAT TAAAGTCGGT TTTAGGGAAA GACTTCTATA CTGACTTAGA AAAATCATCG GGGAAGCTGT ACAGTAGCTT AGACCACCGC CATTGGGACA CGTGGAATGA AGGCAGTTAC AATCACGTGA TGATAGAAGA TAGTAATGGT AAGCAAACCG ATATAATGGA AGGACTGCCC TATTACTGTC CGCAGTTGCC TTTTGGAGGT GATGAGGATT ATATATGGAG TCTAGACGGT AAAAAGGTAC TTTATGTTAC AAAAGCCAAA GTAGGCACTG ATTATGTACT GAGCACTAAT ACTGATATCT ATGAGTACGA CCTCACCTCG AAAAAAACAA CAAACCTCAC CGAAGGAATG ATGGGGTATG ACACTAACCC TCAGTATAAC AAAGAAGGCG TACTTGCGTG GCTCAGTATG GCACACGACG GTAATGAAGC TGATAAAAAC GATCTTTATA TATTGAAGGA CGGCAAGCGC ATTAACCTTA CAGCTAACTG GGATAATACT ATTTTCAGTT ACCGATGGAG CAATGATGGG AAGCAAATAT ACCTAATTGC GGCTACCCAA GGAACAGAGC AAGTATTTGT AGTAGCTCCT TTTAGTAAAG ATACCACTCC AAGACAACTC ACACAAGGCG TATTTGATGT GAATAGTATA GTAGGACAAG CAGGCGACCA ATTGGTTGTG ATGCGCACGG ATATGAACCA CGCAGCTGAA CTGTATACTA TCAACTTAAA AGAGAAAAAA GGACGCATAA CACTATCACA GCTTTCACAT TTTAATGATG AGCTATACAA AGGGATTGCT GAATGTCCTA TTAAGGAGCG TATCATCAAA ACTACTGACG GCAAGAGAAT GCACGCTTGG GTAATTTACC CACCGAACTT TGACCCTAAC AAGAAGTACC CTACCCTACT CTACTGCCAA GGAGGACCAC AATCTGTTGT GAGCCAATTT TACAGTTTCC GTTGGAACTT CCAAGTAATG GCTTCACAAG GTTATATAGT GATAGCTCCC AACCGCAGAG GATTACCAGG CTTTGGGGTA GAATGGAATG CAGAAATCAG TGGAGATTGG GGTGGACAGC CTATGCGCGA TTATCTATCG GCTATTGATG ATATTGCTAA GGAACCTTAT GTAGACAAAG ACCGATTAGG AGCCATTGGT GCCAGCTACG GAGGATATTC AATCTACTAC TTAGCAGGTA TTCACCAAAA ACGTTTCAAG ACGTTTATTG CCCATTGCGG AGTATTTAAC TTACAAAGTA TGTATGGCAC TACCGAAGAG CTTTTCTTCA ACAATAACGA AATAGGAGGT GCTTATTGGG ATAAAAAGAA CGCTGTAGCG CAAAAATCGT ATAAAGAGTT TAATCCTATA GAGAAGATTA CAGAATGGGA CACCCCTATT CTCATCATTC ACGGAGGGAA AGACTACCGA GTACCCGAAG AACAGGGATT CCAAGCTTTT ACAGCAGCTC AACTGAGAGG CATCAAAAGT GAGTTACTTT ATTTTCCTGA TGAGAACCAC TGGGTATTAC AACCTCAGAA TGGACTCTTA TGGCAGAGAA CATTCTTCAA ATGGCTAAAA GAAACATTAT AA
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Protein sequence | MKKHLIILAS VMAFNSIQAQ QPLTPEKLWE LHRVNGIGIT PDQQYVLVSV STPNIKENTF NKEYYKLAVK GGVPIPISKE EVEKLTAKYN TDKSLKLTHK EVKLKSVLGK DFYTDLEKSS GKLYSSLDHR HWDTWNEGSY NHVMIEDSNG KQTDIMEGLP YYCPQLPFGG DEDYIWSLDG KKVLYVTKAK VGTDYVLSTN TDIYEYDLTS KKTTNLTEGM MGYDTNPQYN KEGVLAWLSM AHDGNEADKN DLYILKDGKR INLTANWDNT IFSYRWSNDG KQIYLIAATQ GTEQVFVVAP FSKDTTPRQL TQGVFDVNSI VGQAGDQLVV MRTDMNHAAE LYTINLKEKK GRITLSQLSH FNDELYKGIA ECPIKERIIK TTDGKRMHAW VIYPPNFDPN KKYPTLLYCQ GGPQSVVSQF YSFRWNFQVM ASQGYIVIAP NRRGLPGFGV EWNAEISGDW GGQPMRDYLS AIDDIAKEPY VDKDRLGAIG ASYGGYSIYY LAGIHQKRFK TFIAHCGVFN LQSMYGTTEE LFFNNNEIGG AYWDKKNAVA QKSYKEFNPI EKITEWDTPI LIIHGGKDYR VPEEQGFQAF TAAQLRGIKS ELLYFPDENH WVLQPQNGLL WQRTFFKWLK ETL
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