| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1807 |
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| Symbol | |
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| ID | 8368255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2154577 |
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| End bp | 2157684 |
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| Gene Length | 3108 bp |
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| Protein Length | 1035 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984249 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003141913 |
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| Protein GI | 256820634 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.489965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACT ACCTATACAT TATTATATCA TTTTTTCTAA CTATAGTCTC TTATGCCCAA
CACTTGGATT CCATTTTTGA AAATCCAGCA CTGCAAGAAA TCAATCGAAT GTCAATGCGT
GCCTCCTACT TTCCGTTTGA GAATATAGCT AAAGCAAAAA ATGGTATGAT AGAGCAATCA
GCACGTTTCC TAAATCTCAA TGGCTTGTGG TCATTCCTTT GGAAAGAAGA CTACCGTCAG
TTGCCAAAAG ACTTCTACAA AACCAATTTT AACGAAAGTC AGTGGAAGAA AATTCCTGTA
CCTTCTAATT GGGAAGTACA GGGATATGGC ATTCCAATTT ACGTGAACGC TTCTTACGAA
TTCAATCAAA AGAACCCTAC TCCTCCCGAT ATTCCTGATA GTCTCCAACA AAATGCTGGT
CTGTATCGCA AAACTTTTGA TTTGCCCACT TCTTGGCAAG GAGAAAAGGT ATATCTACAT
TTAGGAGCAG TGAAATCGGC ATTTAAACTG TATATAAACG GTAAATTTGT GGGTATGGGT
AAAGACAGCA AGTTGGCTTC TGAATTTGAC ATTACACCTT ATATCACTAA GGGCAAAAAC
CTTATTGCAA TGGAAGTGCG TCGATGGACG GACGCAAGCT ATCTCGAATG CCAAGATATG
TGGCGCTTTT CTGGGATTTC TCGTGATTGC TACCTATATA TGCGACCTAA AGTGCATTTA
TACGACCTTA GTATCAGCGC TGGTTTAGAT AAAAACTACA CCAATGGCAA ACTCACCACT
TCGGTAGAAG TATGGAACGA AACTCCAAGC GATGTCTCCA AATACCAAGT GGAAGTAAGT
CTGTTCGACA AAGAACAACT GCTCTACCAA GAGCAAAAAG CAACTATCGG ACTCAAAAAA
GCCTTTGGTA AAACCGAATT GCAATTCGAA GCACAATTGC CACAAGTGAG AGCGTGGAGT
GCTGAAACGC CTTATCTGTA CCGTTTACAA ATGGCGCTGT ACGATGCTGA GGGAAAGGTG
AAAGAAGTAG TAAGTCGTCC CATAGGCTTT AGAACGATTG AGATAGAAGG GGCTAACATT
TTGGTAAACG GCAAACGCAT ACTCTTCAAA GGGGTGAACC GTCACGAAAC CGACCCGCAT
ACGGGACAAG TAGTGAGTCA AGAACAGATG GAGAACGATG TAAAGCAGAT GAAAGCCCTC
AATTTTAATG CGGTACGTAC CTCTCATTAC CCTAACGACC CTTATTTCTA TGACCTTTGT
GATAAATATG GGCTTTATGT AATGGACGAG GCTAATATAG AAAGCCACGG TATGCATTAT
GAAATGGATA AGACTATCGG TAATGACCCC GTGTGGGAAT ATGCTCATTT GCTACGTATG
GAACGTATGG TAAAGCGCGA TAAAAACCAC CCATCAGTAT TGTTTTGGAG TATGGGCAAC
GAGTCAGGTA ACGGTTGGAA CTTCTACAAA GGTTATCAAC ACATAAAAGG CTTAGACTCC
TCACGCCCTA TTCACTATGA ATTAGCTCAC TACGATTGGA ATACTGATAT TGAGTCGCGT
ATGTACCGTC GTATTCCTTT CCTTATCGAC TATGCGCTCA GCAATCATAC TAAACCCTTC
TTGCAATGTG AATACGCTCA CGCAATGGGT AACAGTGTAG GTAACTTTCA AGAATATTGG
GACGTGTATG AACATTATCC TAAACTACAA GGTGGTTTTA TTTGGGATTT CATCGATCAA
GGGCTTTATA AAACCTTATC TAATGGCAAG AAAATAGTAA CCTACGGGGG TGATTATGGT
GATAAAAATA CTCCCAGCGA TAATAATTTT CTTATCAATG GAGTAATAGC TTCCGACAGA
AGTTGGCATC CTCACGCCTA TGAAGTACGC AAAGTGCAAC AAGAAATAGG CTTTCAATAT
CAAAATAACC AACTGATATT GCGCAATAAA CATTTCTTTA AAGATTTATT AAACTACGAA
ATATATTGGC AACTGCTCAA AGAAGGTGTT CCTGTTCAAA GTGGTAATAT TACCAACTTA
ATAGTATTAC CACAAAGCGA GGCTACTTTT TTACTACCTC CTCTTAAAAC AGACGATAAA
GCAGAATATA TCTTGCAATG TACCGCCCGT CTCAAACAAG ACGAAGGCCT TTTAAAGAAA
GGTACAGAAC TCGCTTTTGC CGAGTTTCCT CTCACCTCCT ACTCTCCTCA AAAAGCTATT
GCTGATACAA CACCTTTACA GGTAGAAGAA ACAGCCAGTC ATATTCTATT GTATAATAAG
CACTATACAG CCAAAATAGA TAAACAAACA GGCAAATGGG TATCGTTTCA AGTGAAGAAT
GAAGAACTCT TTGCTCCCGA AGGCTTAGAG GTGAATTTAT GGCGAGCTGG GACTGATAAT
GATTTTGGGG CAGGTTTACC TAAAAAACTA CAACAGCTAC AAGAGGCAGA TAAAAAAGCT
GATAGTGTCC GTATATCGGT AGAAAAACTC AACTCCGGTC AAGTGAAGAT AACCCTACGC
AAGCGATTGG TAGAAGGTAC AATTAATTAT ACTCAAGAGT TGCTTTTTGA TGGCAAGCCT
TCCGTAACGG TGAGCAATCA CTTCAAACCG CTAAAGAACG ACAAAACGCT TACTTTTAAG
ATAGGCAATC ATCTTACACT ACTGCCTTTT CAGCGCATTC AGTGGTATGG TAGAGGTCCT
TGGGAAAGTT ATTGGGATAG GAAAACATCG GCTATGGTAG GCTTGTACGA AGGTGCTATT
GTTAGCCAGT ATTACCCTTA TGTGCGTCCG CAAGAGAATG GTAATAAAAC TGATGTACGT
TGGGCAAAGC TCAGTAAGAA AAAAGGAGTA AACATTGCCA TTTATAGTAC AGGTTCTTTA
CTAAATATAA ATGCCCTGCC TTATAGTCCT GCACAGTTAT TTCCTGGTAT AGAAAAAGGA
CAAACACACG CAGGTGAACT CACCCCTGAT AAGTATACTC ACTTAGACAT CGATTTGCAA
CAATTAGGTT TGGGAGGTGA TAACAGCTGG GGCAACTTAC CTATGGAACA ATACTTACTG
TATCTGTATC AGCCTTACAG CTATAGTTAC AGAATAGAAG CTTTTTAA
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| Protein sequence | MKNYLYIIIS FFLTIVSYAQ HLDSIFENPA LQEINRMSMR ASYFPFENIA KAKNGMIEQS
ARFLNLNGLW SFLWKEDYRQ LPKDFYKTNF NESQWKKIPV PSNWEVQGYG IPIYVNASYE
FNQKNPTPPD IPDSLQQNAG LYRKTFDLPT SWQGEKVYLH LGAVKSAFKL YINGKFVGMG
KDSKLASEFD ITPYITKGKN LIAMEVRRWT DASYLECQDM WRFSGISRDC YLYMRPKVHL
YDLSISAGLD KNYTNGKLTT SVEVWNETPS DVSKYQVEVS LFDKEQLLYQ EQKATIGLKK
AFGKTELQFE AQLPQVRAWS AETPYLYRLQ MALYDAEGKV KEVVSRPIGF RTIEIEGANI
LVNGKRILFK GVNRHETDPH TGQVVSQEQM ENDVKQMKAL NFNAVRTSHY PNDPYFYDLC
DKYGLYVMDE ANIESHGMHY EMDKTIGNDP VWEYAHLLRM ERMVKRDKNH PSVLFWSMGN
ESGNGWNFYK GYQHIKGLDS SRPIHYELAH YDWNTDIESR MYRRIPFLID YALSNHTKPF
LQCEYAHAMG NSVGNFQEYW DVYEHYPKLQ GGFIWDFIDQ GLYKTLSNGK KIVTYGGDYG
DKNTPSDNNF LINGVIASDR SWHPHAYEVR KVQQEIGFQY QNNQLILRNK HFFKDLLNYE
IYWQLLKEGV PVQSGNITNL IVLPQSEATF LLPPLKTDDK AEYILQCTAR LKQDEGLLKK
GTELAFAEFP LTSYSPQKAI ADTTPLQVEE TASHILLYNK HYTAKIDKQT GKWVSFQVKN
EELFAPEGLE VNLWRAGTDN DFGAGLPKKL QQLQEADKKA DSVRISVEKL NSGQVKITLR
KRLVEGTINY TQELLFDGKP SVTVSNHFKP LKNDKTLTFK IGNHLTLLPF QRIQWYGRGP
WESYWDRKTS AMVGLYEGAI VSQYYPYVRP QENGNKTDVR WAKLSKKKGV NIAIYSTGSL
LNINALPYSP AQLFPGIEKG QTHAGELTPD KYTHLDIDLQ QLGLGGDNSW GNLPMEQYLL
YLYQPYSYSY RIEAF
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