Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1804 |
Symbol | |
ID | 8368252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2147159 |
End bp | 2148433 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644984246 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_003141910 |
Protein GI | 256820631 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.129401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAACA AAAAACATAT CGTAATTGTG GGCGGTGGCT TTGCTGGCTT AGAGCTAGTA AAAGTGTTGA ACCGTTCTGG TAAATATAAA ATTACCTTGG TGGATATGAA TAACTACAAT TTCTTTCCAC CCCTACTATA TCAGTTGGCT GCAGGCTTTA TGGAGCCTTC ATCTATCTCC TACCCTTTCC GCCGTCTATT TCGCAAGTAT AAAAATACAC GTTTCAGAAT GGCTACCTTG CGAGAAGTCG TTCCATCGGA AAACAAACTC ATCTTGAGCA ATGGAGAACT GCATTATGAC GTATTGGTAA TGGCTACGGG AGCTGAATCA AACTTCTTTG GTAACAAAGA TGTAGAAGAA AAAGCAATGC CTATGAAAAC CGTAGGCGAC GCCCTTATGC TTCGTAACTT AGTATACACC CGTTTGGAGC GCGCTACCCG TACTGAGGAC AAAGAATTGC GCCGTAAGCT ACTCTCTTTT GCTATTGCAG GAGCAGGTCC TACTGGGGTA GAGTTATCAG GTATCTTTGC TGAAATGAAA CAGAACATTA TGCGCAAAGA TTACCCTGAG CTTACTTATG ATGATTTAGG TGATATTTAT CTCATCGACG GACAAAACAC CGTACTTGCT CCTATGAGTA AAAAAGCCCA AGCATATACC GAAAAAATCT TGCTTAAAAA AGGTGTAAAA CTCAAATTAG GAGTACAGGT AACCGATTTT CTAAATGACG AAGTATACCT TTCGGACGGT ACAGTGCTCG ATGCTCGTAA CCTAATATGG GCAGCGGGGA TTTCGGCTAA AACCTTCAAA GGTATTGACG ACAAGCAACA CTTGGGGCGT GGGCGACGTA TGAAAACCGA TGCTTATAAC AAAATGGAAG GATTTGAAAA CATCTATGCA ATCGGCGATT CGTCTATTAT GACTTCCGAC CCTCACTTTC CTCAAGGGCA CCCTCAGCTC GCACAAGTAG CCATACAACA AGCCAATAAC TTAGGAAAAA ACTTCAATAA AGATTTTGTA AACCCTACTC CTTTCAGTTA TGTCGATAAA GGTTCAATGG CAATTATTGG TCGTAACCAA GCCGTCGCCG ATTTGCCTAA ACACATTTTC CTCAAAGGTT TCGTAGCGTG GGCTATTTGG GCGTTTATAC ACATAATGTC GCTGGTAAAC TTCCGCAACA AGCTGAAAGC TTTGTACAAT TGGGTAGGTT ATTACATCAG CAAAGACCAG TCGTATCGTA TGGTATTACG CCCTACCGAA AAAGCTAAAG GATAA
|
Protein sequence | MENKKHIVIV GGGFAGLELV KVLNRSGKYK ITLVDMNNYN FFPPLLYQLA AGFMEPSSIS YPFRRLFRKY KNTRFRMATL REVVPSENKL ILSNGELHYD VLVMATGAES NFFGNKDVEE KAMPMKTVGD ALMLRNLVYT RLERATRTED KELRRKLLSF AIAGAGPTGV ELSGIFAEMK QNIMRKDYPE LTYDDLGDIY LIDGQNTVLA PMSKKAQAYT EKILLKKGVK LKLGVQVTDF LNDEVYLSDG TVLDARNLIW AAGISAKTFK GIDDKQHLGR GRRMKTDAYN KMEGFENIYA IGDSSIMTSD PHFPQGHPQL AQVAIQQANN LGKNFNKDFV NPTPFSYVDK GSMAIIGRNQ AVADLPKHIF LKGFVAWAIW AFIHIMSLVN FRNKLKALYN WVGYYISKDQ SYRMVLRPTE KAKG
|
| |