Gene Coch_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1804 
Symbol 
ID8368252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2147159 
End bp2148433 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content42% 
IMG OID644984246 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003141910 
Protein GI256820631 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.129401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA AAAAACATAT CGTAATTGTG GGCGGTGGCT TTGCTGGCTT AGAGCTAGTA 
AAAGTGTTGA ACCGTTCTGG TAAATATAAA ATTACCTTGG TGGATATGAA TAACTACAAT
TTCTTTCCAC CCCTACTATA TCAGTTGGCT GCAGGCTTTA TGGAGCCTTC ATCTATCTCC
TACCCTTTCC GCCGTCTATT TCGCAAGTAT AAAAATACAC GTTTCAGAAT GGCTACCTTG
CGAGAAGTCG TTCCATCGGA AAACAAACTC ATCTTGAGCA ATGGAGAACT GCATTATGAC
GTATTGGTAA TGGCTACGGG AGCTGAATCA AACTTCTTTG GTAACAAAGA TGTAGAAGAA
AAAGCAATGC CTATGAAAAC CGTAGGCGAC GCCCTTATGC TTCGTAACTT AGTATACACC
CGTTTGGAGC GCGCTACCCG TACTGAGGAC AAAGAATTGC GCCGTAAGCT ACTCTCTTTT
GCTATTGCAG GAGCAGGTCC TACTGGGGTA GAGTTATCAG GTATCTTTGC TGAAATGAAA
CAGAACATTA TGCGCAAAGA TTACCCTGAG CTTACTTATG ATGATTTAGG TGATATTTAT
CTCATCGACG GACAAAACAC CGTACTTGCT CCTATGAGTA AAAAAGCCCA AGCATATACC
GAAAAAATCT TGCTTAAAAA AGGTGTAAAA CTCAAATTAG GAGTACAGGT AACCGATTTT
CTAAATGACG AAGTATACCT TTCGGACGGT ACAGTGCTCG ATGCTCGTAA CCTAATATGG
GCAGCGGGGA TTTCGGCTAA AACCTTCAAA GGTATTGACG ACAAGCAACA CTTGGGGCGT
GGGCGACGTA TGAAAACCGA TGCTTATAAC AAAATGGAAG GATTTGAAAA CATCTATGCA
ATCGGCGATT CGTCTATTAT GACTTCCGAC CCTCACTTTC CTCAAGGGCA CCCTCAGCTC
GCACAAGTAG CCATACAACA AGCCAATAAC TTAGGAAAAA ACTTCAATAA AGATTTTGTA
AACCCTACTC CTTTCAGTTA TGTCGATAAA GGTTCAATGG CAATTATTGG TCGTAACCAA
GCCGTCGCCG ATTTGCCTAA ACACATTTTC CTCAAAGGTT TCGTAGCGTG GGCTATTTGG
GCGTTTATAC ACATAATGTC GCTGGTAAAC TTCCGCAACA AGCTGAAAGC TTTGTACAAT
TGGGTAGGTT ATTACATCAG CAAAGACCAG TCGTATCGTA TGGTATTACG CCCTACCGAA
AAAGCTAAAG GATAA
 
Protein sequence
MENKKHIVIV GGGFAGLELV KVLNRSGKYK ITLVDMNNYN FFPPLLYQLA AGFMEPSSIS 
YPFRRLFRKY KNTRFRMATL REVVPSENKL ILSNGELHYD VLVMATGAES NFFGNKDVEE
KAMPMKTVGD ALMLRNLVYT RLERATRTED KELRRKLLSF AIAGAGPTGV ELSGIFAEMK
QNIMRKDYPE LTYDDLGDIY LIDGQNTVLA PMSKKAQAYT EKILLKKGVK LKLGVQVTDF
LNDEVYLSDG TVLDARNLIW AAGISAKTFK GIDDKQHLGR GRRMKTDAYN KMEGFENIYA
IGDSSIMTSD PHFPQGHPQL AQVAIQQANN LGKNFNKDFV NPTPFSYVDK GSMAIIGRNQ
AVADLPKHIF LKGFVAWAIW AFIHIMSLVN FRNKLKALYN WVGYYISKDQ SYRMVLRPTE
KAKG