| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1801 |
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| Symbol | |
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| ID | 8368249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2144008 |
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| End bp | 2144868 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644984243 |
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| Product | glycoside hydrolase family 25 |
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| Protein accession | YP_003141907 |
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| Protein GI | 256820628 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.783073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAAAGCTACA AAGAAGTAAG TCTCGTATAT CTGCAAAAAA GAAATCTCTA
TTTGGGAACT TTTTTACTGT AAGCCTCCTA TGCATTTTGT TGTTGGGAGT AGGTAGCGTT
TTCTATATCA GAACCTATTA TCCTGCCATT TACCAAAAAA TACTAAACAA AATTACAGCC
CGTAAAATAA ACTCTACCTA CGAAAGCAAT CGTATTGAAC ATATCGTAAG CCTCTACTAC
GATAAAGTCT TCGGTATCGA CCTTTCGCAC TATCAAGAAC GCGAAGAAAT AGAATGGGAT
AGCCTCTACA TCCGAAATAA AACTGCAAAA TACCCTATCC AATTTGCCAT TTTTAGAGCA
ACAATGGGGA ACGATGGAAC CGATAAGAAC TTTGCACACT TTTTTTCAGA AGCTAAAAAA
CACCAACTTA TCAGAGGAGC TTACCATTAC TATCGTCCAG ACGAAGACCC TAAGCTACAA
GCAAACTCCT ACCTGAAGAA TGCTCGGTTG GAAAAAGGAG ATTTCTTACC TATTTTAGAT
ATAGAACAAT TGCCTAAAAA GAAATCCAAA GAACAGTTTA TTAAAGATGT ACAAACGTGG
TTAGATATTG TTGAAAAACA CTACAAACGC AAACCTATTA TCTATACTTA CATCAGTTTT
TACGAAGATT ATTTGTATCC CACATTCAAG CAATACCCAT TATGGATAGC CAATTATAAT
AATGTGTCAG TCCCCACCTC TGTTTTTTCT TGGCAGTTAT GGCAATTCAC TGAAAATGGT
ATTACTGCGG GAGCAAAAGT CAAAATAGAT TTTAATATTT TCAATGGTGA TAGTAGCGAA
CTGAACAAAC TCTTATTGTA G
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| Protein sequence | MKKKKLQRSK SRISAKKKSL FGNFFTVSLL CILLLGVGSV FYIRTYYPAI YQKILNKITA
RKINSTYESN RIEHIVSLYY DKVFGIDLSH YQEREEIEWD SLYIRNKTAK YPIQFAIFRA
TMGNDGTDKN FAHFFSEAKK HQLIRGAYHY YRPDEDPKLQ ANSYLKNARL EKGDFLPILD
IEQLPKKKSK EQFIKDVQTW LDIVEKHYKR KPIIYTYISF YEDYLYPTFK QYPLWIANYN
NVSVPTSVFS WQLWQFTENG ITAGAKVKID FNIFNGDSSE LNKLLL
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