Gene Coch_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1800 
Symbol 
ID8368248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2143419 
End bp2144006 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content38% 
IMG OID644984242 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_003141906 
Protein GI256820627 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA AAGAACTCAG GACACTCTAT AAGCAAAAAC GCAATGCCCT ATCAGCTGAG 
GAGCGAGACC TCCTCAGCCG ACAAATAGCT GAAAGGTTAC TTCTTTTTCC TAATTCTTTA
TGGGAGCATC ACACTTACCA TATATTCCTC CCCATAGAAC GATTAGCTGA AATAAACACG
AATTATATAT TAGACATACT ACGCGATAAG AATAAGCAAA TAGTAGTCCC TAAAATGGAT
AACAATACTC GCACGCTGTC CTCTATTCTT CTCACCAAAG ATACTCAGCT CATTAATAAC
GCTTGGGGTA TTCCCGAACC TAAACAAGGT GTTATTATAA CTCCCAAAAC CATAGATGTA
GTATTCGTTC CTCTTCTTTC CTATGATAAA TATGGCAATC GGATAGGCTA TGGTGGTGGC
TATTACGACC GTTTTTTGAG TGAATGCAGA GGTGATACAC TCAAAATAGG ACTCTCCTAC
TTCCCTCCTG AAAATAACTT TTATGCTTTG AGAAATGCTA CTGATGTTTT TTTAGATTAT
ACTATCACTC CTTCCGCAAA TTACACACTC ACAAAAAGAG AATATTGA
 
Protein sequence
MTKKELRTLY KQKRNALSAE ERDLLSRQIA ERLLLFPNSL WEHHTYHIFL PIERLAEINT 
NYILDILRDK NKQIVVPKMD NNTRTLSSIL LTKDTQLINN AWGIPEPKQG VIITPKTIDV
VFVPLLSYDK YGNRIGYGGG YYDRFLSECR GDTLKIGLSY FPPENNFYAL RNATDVFLDY
TITPSANYTL TKREY