Gene Coch_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1793 
Symbol 
ID8368240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2134271 
End bp2135179 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content36% 
IMG OID644984234 
Productmetallophosphoesterase 
Protein accessionYP_003141899 
Protein GI256820620 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC GTACTTTTAT TAAAAACATA GGAGCTTCAT CTTTGCTAAT GGGGGTAGGA 
GGTCTATCAC TATCAATGAA GCCAAGCAAT GCAAAACAAA TTACTATTTT GCATACGAAC 
GACGTACACA GTCACATCGA CCCTTTTCCT ATTACTGACC CTCATAACCC TAATAAAGGA 
GGAATAGCAC GTAGGGCATA TCTCATCGAC CAAGTACGTA AAGAAAATCC TCATACCTTG 
CTTTTCGATG CAGGAGATAT TTTTCAAGGC ACTCCTTATT TTAATTTCTA TGGAGGTGAG 
TTAGAGTTTA AGCTAATGTC AATGCTTAAA TACGACGCTG CTACCTTAGG GAATCACGAT 
TTTGACAATG GGGTAGAGGG GCTTTTTGCA CAGCTTCCTC ACGCCAAGTT TGATTTTATT 
ATTTCTAATT ACGATGTAAG TAAAACGCTC CTCAATGGGT ACACAAACCC CTATAAAATT 
TATATGGTAG ATGGTATTAA AATAGGAGTT TTTGGTCTGG GCGTTGAATT GGAAGGTTTG 
GTAAATAAAA AACAATACGG CGAAACAGTT TATCTGAACC CTATAGAGAT AGCACAAGAT 
ATGGAACGCA AACTCTATAA TGAAGAACAT TGTGACTTAA TTCTCTGTCT GTCTCACTTA 
GGATATGATT ACAAAAATAG CCCTAAGGTC TCCGATTTAA AAGTAGCTGC TCAAACCTCT 
TATATCGATT TAATTATAGG AGGTCATACA CATACTTTTT TACCTCATCC TACTTTGGTT 
ACAAATAAAA GAGGAAAAAC TACTTTGGTA AATCAAGTAG GTTGTTATGG TATTAATTTG 
GGAAGAGTAG ACTTCTTTTT TGAGGAAGGT AGCTTTGTAA AAAACAAAGC AGTGACTATT 
GAAGTTTAG
 
Protein sequence
MKRRTFIKNI GASSLLMGVG GLSLSMKPSN AKQITILHTN DVHSHIDPFP ITDPHNPNKG 
GIARRAYLID QVRKENPHTL LFDAGDIFQG TPYFNFYGGE LEFKLMSMLK YDAATLGNHD 
FDNGVEGLFA QLPHAKFDFI ISNYDVSKTL LNGYTNPYKI YMVDGIKIGV FGLGVELEGL 
VNKKQYGETV YLNPIEIAQD MERKLYNEEH CDLILCLSHL GYDYKNSPKV SDLKVAAQTS 
YIDLIIGGHT HTFLPHPTLV TNKRGKTTLV NQVGCYGINL GRVDFFFEEG SFVKNKAVTI 
EV