| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1788 |
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| Symbol | |
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| ID | 8368235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2128287 |
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| End bp | 2129615 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984229 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003141894 |
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| Protein GI | 256820615 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0241232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATA ATTTAAGTGA TAAATTAGAG AAAGCCCTAC ATAACTTAAA GGGACACGGT
AAGATTACCG AAATAAACGT AGCTGAAACA CTGAAAGAAG TGCGTCGCGC TTTGCTTGAT
GCCGACGTGA ATTATAAGAT AGCCAAAGAT TTTACCAATA ACGTAAAAGA AAAAGCCTTA
GGACAACAAG TGCTCACTAC CCTACAACCA GGGCAGTTAA TGGTGAAGAT TGTAAAAGAT
GAGCTCACCC AGCTAATGGG AGGAGATGCT GCTGGAGTGA ACCTATCGGG GAATCCTACT
GTTATATTGA TGTCGGGGTT ACAAGGTTCT GGTAAGACTA CTTTCTCAGG AAAATTGGCT
AACTACCTCA AAAATAAAAG AAATAAAAAA CCATTACTCG TAGCGTGCGA CGTGTATCGT
CCTGCTGCGA TAGATCAATT ACATATTGTA GGAGAACAGG TGGGGGTACC TGTTTTTTCG
GATAAAGGGA ACAATAACCC TGTGGATATT GCCAAAAAAG GGGTGCAATA CGCCAAAGAA
AACCACTTGA ACGTGGTGAT TGTGGATACC GCAGGTCGGT TGGCAGTAGA CGAGCAAATG
ATGACCGAAA TATCGAATAT CCACAAAGCA CTGAACCCAC AAGAAACCCT TTTTGTAGTA
GATGCGATGA CGGGGCAAGA TGCTGTAAAC ACGGCTAAAG CCTTCAACGA TGTGCTCAAC
TTCGATGGGG TTATCCTTAC CAAACTCGAT GGAGACACCC GTGGTGGGGC GGCTATCACT
ATTAAATCGG TAGTGAATAA ACCTATCAAA TTCGTAGGTA CCGGCGAGAA AATGGACGCT
ATTGATGTGT TCTATCCTGA TCGTATGGCT GACCGTATTC TCGGTATGGG CGACGTGGTA
TCATTAGTAG AACGCGCTCA AGAGCAGTTT GACGAAGAGC AAGCGCGCAA ATTGCAAAAG
AAAATTGCAA AAAACCAATT TGGGTTTGAC GACTTTCTTG AACAAATACA GCAAATTAAG
CGTATGGGTA GTATGAAAGA CCTCCTTGGT ATGCTCCCCG GTGTAGGGAA AGCAGTGAAA
GACCTCGATA TCAAAGACGA CGCTTTCAAG CATATCGAAG CAATTATCCA TTCGATGACT
CCAAAAGAGC GCAATACGCC TGCTATCATA GATTTAAACC GCAAAAAACG AATTGCCAAG
GGTAGCGGTC GCGATATTCA AGAGGTAAAC CAACTAATGA AACAGTTCGA GCAAATGAGC
AAGATGATGA AAATGATGCA AGGTGGCGGT GGCAGAAAGA TGATGCAGAT GATGCAGGGA
ATGAAGTAA
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| Protein sequence | MFDNLSDKLE KALHNLKGHG KITEINVAET LKEVRRALLD ADVNYKIAKD FTNNVKEKAL
GQQVLTTLQP GQLMVKIVKD ELTQLMGGDA AGVNLSGNPT VILMSGLQGS GKTTFSGKLA
NYLKNKRNKK PLLVACDVYR PAAIDQLHIV GEQVGVPVFS DKGNNNPVDI AKKGVQYAKE
NHLNVVIVDT AGRLAVDEQM MTEISNIHKA LNPQETLFVV DAMTGQDAVN TAKAFNDVLN
FDGVILTKLD GDTRGGAAIT IKSVVNKPIK FVGTGEKMDA IDVFYPDRMA DRILGMGDVV
SLVERAQEQF DEEQARKLQK KIAKNQFGFD DFLEQIQQIK RMGSMKDLLG MLPGVGKAVK
DLDIKDDAFK HIEAIIHSMT PKERNTPAII DLNRKKRIAK GSGRDIQEVN QLMKQFEQMS
KMMKMMQGGG GRKMMQMMQG MK
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