| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1780 |
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| Symbol | |
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| ID | 8368227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2120540 |
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| End bp | 2121781 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984221 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003141886 |
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| Protein GI | 256820607 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGATTG TAATTCGTGA AAATATAAAA ATAGCTCTTG ACAGTATCAG AGGGCAACTA
TTGCGCACAA TTCTCACCGT GCTCATCATC GCTATTGGCA TTACGGCATT GGTAGGAATT
CTGAGCGTAA TTACTGCTTT GCGCAATACG CTTGAAGGTA ATTTCTCGAG TATGGGAGCT
AATACTTTTT CGATTACAAG GTATCAATAC AGTCAGCGAG CTGAGGGGAG TGGAACCACC
CAAAAGCCAC ACCCTTTAAT TACCTATCAA GAAGCAGTAG CTTTTAAACA ACAGTTAGAT
AATCCGTTTG CAAAAACGAG TATTTCTATG AATGTTGCCT CCTCAGCTGA GGTGAAGTAC
GAGAACAAAA AAACTGACCC ATTAGCCGTA GTGATAGGCG TAGATGAATA CTACATTGGC
AATTCGGGGT TAGAAGTGGA AGAGGGACAC AATTTTAGCG ATTTCGATAT ACAGAACAAT
AGCTATGTGT GCGTGATAGG TCCGGATTTT AAGAAGACAC TACTCAAAGA TGTAAATCCA
TTAGGAAAGA GCATTTCGGT ACGTGGTTAT AAGTTCAAAG TCATAGGTAT ACTTAAAGAA
CAAAGTTCCT CCTTTGGCAA TTACGAAAAC TTTCAAGTGT TGATTCCTTT AGGAATTGCA
CGCAGTATTT TCCCGATAGA CAATCCTAAT TTTCAACTCA AAATAAGCGC TCAGAGCAAA
GACCAGTTGG ACGGACTTAT AGATGATGCT ACCGTAGTGA TGCGCAACCT GAGAGGCTTA
GCACCTTTAC AAGAAAATAA TTTCGGGATA GAACGCAGTG ACGACTTATT GCAACGCATA
GGCAGTATTA CAGGTACCCT TTCTGTTGCT GGTTTTGTGA TTGGGCTTAT TACCATCTTG
GGGTCTTCAA TCGCCCTATT GAACATTATG CTCGTTTCTG TAACCGAGCG CACTAAGGAG
ATAGGCATTC GCAAAGCGTT GGGAGCTAAA CGCAAGTCTA TTACCTTACA GTTTTTTACC
GAGACCCTAA TAATAGCTCA ATTGGGAGCA CTTACGGGTA TTGTATTAGG TATCAGTTTA
GGATATTTGA TATCTAAAGC CGTTAAGTTT GATTTTACCA TTCCGTGGGG TGTTATTATT
ATTGCTATAT GTATAGCTCT TGTAGTAGCG GTAATATCAG GATTGTATCC GGCAGTAAAA
GCCTCGAAAT TAGATCCTGT AGAAGCGTTG AGATATGAAT AA
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| Protein sequence | MWIVIRENIK IALDSIRGQL LRTILTVLII AIGITALVGI LSVITALRNT LEGNFSSMGA
NTFSITRYQY SQRAEGSGTT QKPHPLITYQ EAVAFKQQLD NPFAKTSISM NVASSAEVKY
ENKKTDPLAV VIGVDEYYIG NSGLEVEEGH NFSDFDIQNN SYVCVIGPDF KKTLLKDVNP
LGKSISVRGY KFKVIGILKE QSSSFGNYEN FQVLIPLGIA RSIFPIDNPN FQLKISAQSK
DQLDGLIDDA TVVMRNLRGL APLQENNFGI ERSDDLLQRI GSITGTLSVA GFVIGLITIL
GSSIALLNIM LVSVTERTKE IGIRKALGAK RKSITLQFFT ETLIIAQLGA LTGIVLGISL
GYLISKAVKF DFTIPWGVII IAICIALVVA VISGLYPAVK ASKLDPVEAL RYE
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