| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1770 |
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| Symbol | |
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| ID | 8368216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2109200 |
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| End bp | 2110507 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984210 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_003141876 |
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| Protein GI | 256820597 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000207484 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAG TAGCATTTTA TACTTTGGGT TGCAAACTGA ACTTCTCGGA AACTTCAACT
ATTGCGCGGA GCTTTGAAGA AGAAGGCTAC CAGCGCGTAG ATTTTGACGA TCCTGCTGAT
ATATATGTCA TCAATACTTG TTCGGTAACT GAAAATGCTG ACAAGCAATT CAAACAAATC
GTACGTAAAG CACTGAAAAC AAACCCTAAA GCATTCTTGG CGGCAGTGGG TTGTTATGCC
CAACTGAAAC CCGAAGAACT CGCTTCGGTA GATGGGGTAG ATTTGGTATT GGGAGCAAAA
GAAAAGTTCA ACATTACCCA ATATATCGAC GACCTTACCA AAAACAATGA GGGTGTGGTA
CACTCCTGCG AGATTTCGGA AACTGATTTC TATGTGGGGA GCTACTCTAT TGGAGACCGT
ACGAGGGCTT TCCTAAAAGT GCAGGACGGT TGCGACTATA AATGCACTTA CTGTACCATA
CCGATGGCAC GAGGTATTTC GCGCAGTGAT ACTATTGAAA ATATCATTGC TAATGCTAAG
AAAATTTCGG ATAAAGGTAT CAAAGAAATT GTGCTTACGG GCGTGAACAT AGGTGATTAC
GGCAAGGGAG AATTTGGCAA CAAAAAGCAC GAGCATACCT TTTTGGAACT TGTGCAAGCC
CTTGATAAGG TTGAAGGCAT AGAGCGTCTG CGCATCTCAT CGATTGAGCC GAATCTCATT
AAGGACGAAA CAATCGACTT TATAGCGCAA TCTAAGAGCT TTGTGCCTCA CTTTCACATT
CCGTTACAAA GTGGAAGTAA TGAAATTCTC AAAAAGATGA AACGCCGCTA CCTGCGTGAG
CTTTATGTGA GTAGAGTAGC CAAAATACGC GAAGTGATGC CCGATGCTTG CATAGGGGTA
GATGTAATTG TAGGCTTTCC GGGGGAGACC GATGAGCACT TCTTGGAAAC GTATTACTTC
CTGAATGATT TGGACATCTC GTATCTGCAC GTATTTACTT ATTCCGAGCG CGACAATACT
GAGGCGGTGC TAATGGACGG GGTAGTGCCC GATGCCGTAC GCGCTAAACG CAGTAAGATG
TTACGTGGAC TCTCGGCAAA GAAACGCAAT GCCTTTTATA CGAGTCAGCT GGGAAAAGAG
AAGACTGTGC TTTTTGAGAG CGACAACAAA CAGGGTTACA TTCACGGATT TACTGAGAAT
TATGTAAAGG TAAAAGCCCC GTGGGATCCT TCCTTAGTGA ATACATTGCA CAAAGTAAAG
CTCACTAAGA TAGATGCAGA CGGTATGGTA AGATTTGAAT TTGTTTAA
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| Protein sequence | MKKVAFYTLG CKLNFSETST IARSFEEEGY QRVDFDDPAD IYVINTCSVT ENADKQFKQI
VRKALKTNPK AFLAAVGCYA QLKPEELASV DGVDLVLGAK EKFNITQYID DLTKNNEGVV
HSCEISETDF YVGSYSIGDR TRAFLKVQDG CDYKCTYCTI PMARGISRSD TIENIIANAK
KISDKGIKEI VLTGVNIGDY GKGEFGNKKH EHTFLELVQA LDKVEGIERL RISSIEPNLI
KDETIDFIAQ SKSFVPHFHI PLQSGSNEIL KKMKRRYLRE LYVSRVAKIR EVMPDACIGV
DVIVGFPGET DEHFLETYYF LNDLDISYLH VFTYSERDNT EAVLMDGVVP DAVRAKRSKM
LRGLSAKKRN AFYTSQLGKE KTVLFESDNK QGYIHGFTEN YVKVKAPWDP SLVNTLHKVK
LTKIDADGMV RFEFV
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