| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1767 |
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| Symbol | |
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| ID | 8368213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2104767 |
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| End bp | 2106155 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984207 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003141873 |
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| Protein GI | 256820594 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTAT CAAGTTATAC AAAAGAATTC AAATACAACT TTAAAATTGC TTACCCCATC
ATATTAGGAA TGCTCGGGCA CACCCTTGTT GGGTTCGTAG ATAATGTAAT GGTAGGTAAA
GTAGGTATTA CCGAACTCGG AGCTGCTGCT CTGGGTAATA CCGCTATATT CATTGCAATG
TCGTTTGCCA TTGGTTTTTC TGTTGCTAGT ACTTCCTTAG TAGCAATGGC TGATGAAGCA
GGTGATAAAC CAACTGCTCA GTCTATTCTC AATCACGGAA TGGTACTCAA TGTAATATTA
GGAGTAGTAC TCTTCCTTTT ATTGTTTTTT GTAGAACCTG TGATGCGCTA TACAGGACAA
AGCGAGAAAG TAATAGAGTT GGCAGTACCC TACACCCATT TGGTAGCTTT TTCGCTTATT
CCATTGGGTG TTTTCACTAC CTTCAAGCAG TTTGCCGATG GCTTATCAAT GACCAAATAT
GCTATGTATG TTACTATCTT AGCAAACTTG CTAAACGTCT TTCTAAACTA TCTTTTTATT
TATGGTAATT GGGGTTGCCC GAAATTAGGA GTGTTAGGCG CTGGTATTGG CACCTTAGTA
TCACGAATTG TAATGCCTAT AATGCTTTTC TTTATGCTGA AAAACTTAGA GAAGTCGCGT
GAATATGTTA TGAGTATCAG TTTTAAGAAT ATGCAACAAG CAATGTACAA AAAGATAACT
GCTCTCGGAC TCCCTACCGC TATGCAAATG ATTTTTGAAA CAGGTATCTT TACCGCAGCT
ATTTGGATAA GCGGTATGCT GGGCGAAAAT CATTTATCAG CAAACCAAAT TGCGCTCAAC
TTATCGAGTA TGACTTTTAT GGTTGCTAAT GGCTTAGGAA TTACCGCTAT GATACGTGTA
GGAAATCAAT TAGGAGCGAG AAACTATGCT AATTTGCGTA GAGTAGCTAT TTCGGTATTT
CTGTTAGTAC TCTGCACACA AGTATTTTTT GCCCTTCTTT TAGCGGTATT TCGCACTTGG
TTACCGTCAT TGTACTTAGA GATGGATAAC ATAGAAAAAT TAGCTAATAA TACTCTAGTA
ATAGGCGAAG CTACCAATCT CTTGCTCATT GCAGCTATTT TTCAAATATC CGATGGAATG
CAAGTAACAG CTCTTGGTGC CTTACGTGGA GTACAAGATG CTAAAGTGCC TATGTACATC
ACTTTTGTAG CCTATTGGCT GATTGCCTTC CCTATTCTTT ATGTGTTAGG CGTTCATACC
AATTTAGGTA CTATGGGTAT TTGGATTGGC TTGCTCACCG GTCTCACAGT CGCTGCTGTT
TGTCTTTTGT ATAGGTTTAA CCGTATCAGC TTACAACTGA TAGCCAACAG ACACCAATAT
ACTTCTTAA
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| Protein sequence | MSLSSYTKEF KYNFKIAYPI ILGMLGHTLV GFVDNVMVGK VGITELGAAA LGNTAIFIAM
SFAIGFSVAS TSLVAMADEA GDKPTAQSIL NHGMVLNVIL GVVLFLLLFF VEPVMRYTGQ
SEKVIELAVP YTHLVAFSLI PLGVFTTFKQ FADGLSMTKY AMYVTILANL LNVFLNYLFI
YGNWGCPKLG VLGAGIGTLV SRIVMPIMLF FMLKNLEKSR EYVMSISFKN MQQAMYKKIT
ALGLPTAMQM IFETGIFTAA IWISGMLGEN HLSANQIALN LSSMTFMVAN GLGITAMIRV
GNQLGARNYA NLRRVAISVF LLVLCTQVFF ALLLAVFRTW LPSLYLEMDN IEKLANNTLV
IGEATNLLLI AAIFQISDGM QVTALGALRG VQDAKVPMYI TFVAYWLIAF PILYVLGVHT
NLGTMGIWIG LLTGLTVAAV CLLYRFNRIS LQLIANRHQY TS
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