| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1760 |
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| Symbol | |
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| ID | 8368206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2097520 |
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| End bp | 2100189 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984200 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_003141866 |
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| Protein GI | 256820587 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.790958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC TCTTCATTGC TTTTGCTATA GCTATGGCAG TAGGAACTTT TGTAGAAAAT
AGCTATGATA CCGATACCGC CCGTATTTGG GTGTATAACA CTTGGTGGTT TGAGGCGATA
ATGGGGCTTT TTGTGGTAAA TTTTATAGGG AATATCCCTC GCTATCGATT GCTCAAAAAA
GAGAATTGGG CAGTGCTGGT GTTGCACCTC TCGTGGGTGT TTATCATCAT AGGGGCTGGG
GTTACGCGCT ACTTTGGCAA TGAAGGTATG ATTTCTCTAC GCGAAGGAGA AACTACAAAT
ACTTACCTCT CCGACCGCAC TTATATCACT GCAATGGTAG ATGGCAATTA TCAAGGAGCT
CTCTTGCGTA AAAAGAAACA AAAAGAGGCG CTTTTCTCGC CTTATACATC TAATCATTAC
AAGTGGTCGT CCGACTTTAA AGGCAAACCT TTTAGCATTA CGTATAAATC ATTTAAACGC
ATAGGCAAGG AGATGAATGC CTTAGTATTA GAGGTTGTTT CAGGTAATCA GCGCAAGGAA
GTAATCGTAA TGGGCAAACG TGGCGTACAG CACCCTCCTA CCTCTATAGA TTTGAACGGC
TTGCAGTTTC ACCTAAGCTA TGGAGCACGC GAAGAAAAAT TGCCTTTTAG TCTTACCCTC
AACGATTTTA TAGCCGAAAA ATACCCTGGT ACCGAGAATA GTTACGCTTC CTTTAAAAGC
AAAGTAACCG TGAGTGGGGG AGGGGAGAGC TTTCCTTATG ATATTGAGAT GAATCATATT
CTCAATTATC AAGGTTATCG CTTGTTCCAA TCTTCTTTTC ACCCCGATGA ACAAGGTACT
ATACTCTCGG TAAATCGTGA CTTTTGGGGT ACCCTTATCA CTTACGTAGG TTATATACTG
CTCTTCGGCA GTTTGCTGGC ATTTATGTTT GTAGGCAAAT CCCGATTTAG AAAACTCAAT
CAGCAACTTA AAGACCTACA AGCCAAAAGG TTTGCAATCG TTTTGGCATT ATGTTTTGGA
TCTTTGGCTA CTGCCCAAAC CCCTATGGTA GTACCCAACA AAGCGCACGC TGAAAAGTTT
GGTGCAATGC TCATTCAAGA TGATGGGCGT TTTAAGCCCG TGAATACCTT CTCTTCAGAA
CTCTTACGCA AACTTAGTAA ACACGATACT TATAAAGGGC TCACTTCCGA TCAAGTCTTG
CTTTCTATGT TCCTCAGTCC GCAAGCGTGG TATGAGTCAG ACATTATCTA TGTGAAGAAA
GCTAATGACA GTTTGCATCG TTTTTTGGGA GTTCCCGAAG GAACCAAATG GGTAAAGCCT
AAAGATTTTT TTGATGCAAA AGGACAGTAC AAGCTCGCCC CTTTATTGAA AGATATTTAC
AACACAAATA CTCCTAACCA ATTTCAAAAA GATTTTAAGG AAGTAGACCA ACGTATTGGC
TTGCTCAACA GAGCGTTACA AGGCGATATC TTTAAGGTCT TCCCTGTGCC TAATGACCCT
AATTATAAGT GGATTTCGCA CTTAGATTAC ATAAACGACA CCCTACAAAT CACCGACCCA
CTTTACAAAC AATTTGTAAA AAATGCACTG CCAGCTTACC TTATTTTGCT ACAACAAGCC
ACTGAAACAG GCGATTATAG CAAAGCCGAC AAGGTGCTCA ACAATATCAA ACTACAACAA
GAGTTTTACT CGGCTGAGGT ATTGCCTTCA CCTGCCAAAG TACAAACTGA ATTGTGGTAC
AATCGCATCA ATATTTTTGA ACAACTCTTT CAAGCATATT TGTATCTTGG CACAGTGTTA
TTTATAGTAC TATTATGGCA TATTTTTATG CCAAAACAAT TTTTTAGAAG ACTTACCCAA
ATAGGTATAG CCTTGCTGTG GCTCTGTTTT ATCCTGCATA CTGTGGGACT TATTGTTCGT
TGGTATCTTT CAGGTCACGC ACCTTTTAGC GATGCTTATG AGAGTATGAT ATATGTAGGA
TGGTCGGCTA TTGGGGTAGG ACTTTTCTTT TCGCGACGTT CCCCCCTCAC GGTTGCTGCT
ACCGCTTTTG TAACCGCTAT GATACTGATG ATCGCTCACT GGAATTGGAT GGATCCTGCT
ATTGGAACCC TCCAACCCGT ACTCAATAGC TATTGGCTGA TGCTACACGT TGCCGTGATT
GTAGGTAGTT ATGGACCTTT TGCCTTAGGA ATGCTCTTAG GTGTTATCAA CCTCCTACTG
ATGATAGTTA CTACCCGCAA GAATGCTTAT AAAATCAATC TTATACAACA AGAACTCACT
ATCGTAAACG AATTAGCTCT TACAGTGGGA CTTGTGATGC TAACTATAGG CAACTTTTTA
GGAGGTATGT GGGCAAACGA AAGTTGGGGA CGTTATTGGG GGTGGGATCC AAAAGAAACT
TGGGCATTGA TTAGCATTAT GGTTTATGCC TTAGTAATAC ACCTACGCTT GATACCCCAT
TGGCGCGGAC GATGGGCGTT CAATTTTTTG AGTATCATTG CCTTTGGCAG TATCCTAATG
ACTTATTTTG GTGTGAATTT TTACCTTACA GGTATGCACA GCTATGCTAC AGGCGATAAA
ATTATCACCC CTACTTTTGT GTATTATGCT GTGGGTATAG TGCTGTTGTT AGGATTGGTA
TCGTATTTGA GAGTGAAAAA TACATCATGA
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| Protein sequence | MAILFIAFAI AMAVGTFVEN SYDTDTARIW VYNTWWFEAI MGLFVVNFIG NIPRYRLLKK
ENWAVLVLHL SWVFIIIGAG VTRYFGNEGM ISLREGETTN TYLSDRTYIT AMVDGNYQGA
LLRKKKQKEA LFSPYTSNHY KWSSDFKGKP FSITYKSFKR IGKEMNALVL EVVSGNQRKE
VIVMGKRGVQ HPPTSIDLNG LQFHLSYGAR EEKLPFSLTL NDFIAEKYPG TENSYASFKS
KVTVSGGGES FPYDIEMNHI LNYQGYRLFQ SSFHPDEQGT ILSVNRDFWG TLITYVGYIL
LFGSLLAFMF VGKSRFRKLN QQLKDLQAKR FAIVLALCFG SLATAQTPMV VPNKAHAEKF
GAMLIQDDGR FKPVNTFSSE LLRKLSKHDT YKGLTSDQVL LSMFLSPQAW YESDIIYVKK
ANDSLHRFLG VPEGTKWVKP KDFFDAKGQY KLAPLLKDIY NTNTPNQFQK DFKEVDQRIG
LLNRALQGDI FKVFPVPNDP NYKWISHLDY INDTLQITDP LYKQFVKNAL PAYLILLQQA
TETGDYSKAD KVLNNIKLQQ EFYSAEVLPS PAKVQTELWY NRINIFEQLF QAYLYLGTVL
FIVLLWHIFM PKQFFRRLTQ IGIALLWLCF ILHTVGLIVR WYLSGHAPFS DAYESMIYVG
WSAIGVGLFF SRRSPLTVAA TAFVTAMILM IAHWNWMDPA IGTLQPVLNS YWLMLHVAVI
VGSYGPFALG MLLGVINLLL MIVTTRKNAY KINLIQQELT IVNELALTVG LVMLTIGNFL
GGMWANESWG RYWGWDPKET WALISIMVYA LVIHLRLIPH WRGRWAFNFL SIIAFGSILM
TYFGVNFYLT GMHSYATGDK IITPTFVYYA VGIVLLLGLV SYLRVKNTS
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