Gene Coch_1759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1759 
Symbol 
ID8368205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp2096220 
End bp2097137 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content39% 
IMG OID644984199 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 
Protein accessionYP_003141865 
Protein GI256820586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.147863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTCT CACAGCCTTA TACCCTTAAA CAAATAGCTA CTATCATCAA TGCGAAATAC 
GTAGGTGCAG AAGATTTTCC CGTACTTGGA ATGAACGAAA TTCACGTGGT ACAAGCAGGT 
GATATAGTCT TTGTGGATCA TCCTAAGTAT TACGAGAAAG CATTACATTC TAAGGCTACT 
ATTGTACTGA TTAATAAAGA AGTCGAGTGC CCTGAAGGGA AGGCCCTTTT AATATCTGAT 
GACCCTTTTC GCGATTTCAA CAAACTTACT GACTTTTTTA AACCCTTTCA AAATGCAACT 
GCACTTATAG CTCCTTCAGC ACGTATAGGT GAAAATACAG TAGTGCAGCC AGGTGCTTTT 
GTTGGTAATA ATGTAGTAAT AGGTAACAAC TGCCGGATTC ATTCTAATGT GAGTATCTAC 
GACGATTGTG TGATAGGTGA TAACGTAACT ATTCACGCCG GCACAGTGCT CGGAGCAGAT 
GCTTTTTATT ACAAAAAACG TCCCGAAGGT TTTGATAAGC TCAAGTCCGG TGGTCGTGTA 
GTAATTGAGG ATAATGTCGA TTTAGGAGCT CTTTGTACTA TTGATAGAGG AGTAACAGGT 
GATACCACTA TCAAAAAAGG AACTAAGATA GACAATCAAG TGCATATAGG TCATGATACA 
GTAGTAGGAG AGAAGTGCCT CATTGCTTCA CAAACAGGAA TTGCTGGTTG TGTGGTAATA 
GAAAATGAAG TAACCATTTG GGGACAAGTA GGGATGACTA GCGGTATCAC CATAGGTGAG 
AAAGCAGTAA TTTTAGCCCA AAGTGGTATT TCTAAATCCT TAGAGGGTGG ACAAACTTAC 
TTTGGTTATC CTGCTGGTGA AGCTCGTGAG AAATATAAAG AAATGAGTGC ACTCAAACAG 
CTTATCAATT GTAAATAA
 
Protein sequence
MRFSQPYTLK QIATIINAKY VGAEDFPVLG MNEIHVVQAG DIVFVDHPKY YEKALHSKAT 
IVLINKEVEC PEGKALLISD DPFRDFNKLT DFFKPFQNAT ALIAPSARIG ENTVVQPGAF 
VGNNVVIGNN CRIHSNVSIY DDCVIGDNVT IHAGTVLGAD AFYYKKRPEG FDKLKSGGRV 
VIEDNVDLGA LCTIDRGVTG DTTIKKGTKI DNQVHIGHDT VVGEKCLIAS QTGIAGCVVI 
ENEVTIWGQV GMTSGITIGE KAVILAQSGI SKSLEGGQTY FGYPAGEARE KYKEMSALKQ 
LINCK