Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1756 |
Symbol | |
ID | 8368202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2093422 |
End bp | 2094810 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644984196 |
Product | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase |
Protein accession | YP_003141862 |
Protein GI | 256820583 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00128496 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAAGC AAAATACTTT ATCCAAAGAA ATTACCTTAG AAGGTATTGG GTTACATACT GGTAAACAAG TAAAAATGGT GCTCAAACCT GCACCAGTAG GCAATGGTTT TACCTTTGTA CGTACCGATT TAGAAGGAAA CCCCGTTGTC GAAGCGGATG CTACCTATGT AGCAAGTACT GAACGTGGTA CAGTCTTAGA AAAAAAAGGG GTGAAAATCC AAACTTGTGA GCACATCTTA GCAGCGCTCG TCGGTATGGA TTTGGATAAT GTGATTATTG AGCTCAACTC CTCTGAACCT CCTATTATGG ATGGTTCTTC TAAATATTTT GTAGAAGCTA TTGAAAAAGC GGGTATCACT CCTCAAGATG CAGAGCGTGA TGAATATATA GTAAAACAAG TGATTACCTA CGTAAATGAA GAAACAGGTA GTGAGATTAC TCTCATTCCT GCCGAGGAAT ACCAAGTGAC TACAATGGTA GATTTTGGTA CTAAGATTTT GGGCACTCAA AATGCTTACC TCAATAAACT TTCCGAATTT AAAACCGAAA TAGCTGATGC TCGTACTTTT AGTTTCTTGC ACGAGCTCGA AGCTTTACTT GATCACGGTT TGATTAAAGG AGGAGATTTG AATAATGCTA TCGTATATGT AGATAAAGAA ATTTCTGATA GTACGATGCA GAAACTTAAA AAGATTTTCA ACAAAGATAA TATTTCAGTG AAACCTAATG GAGTGCTTGA TAATCTTACT TTGCATTACC CTAACGAAGC TGCTCGCCAT AAACTATTGG ATGTAATAGG CGATTTGGCA TTGGTAGGTA CACGCATTCG TGGTAAAGTA ATTGCTACTA AACCTGGACA CTTCACCAAT ACCCAATTTG CTAAAAAACT TTCTAAGATT ATAAAAAATG AACGTCGTAA CAACGTTCCT TCTATAGATA TTAATCAACC ACCGTTGCTC AACACTACCG ATATAATGAA GTTGTTACCT CACCGTTCAC CATTCTTGTT GGTAGATAAA ATCTTTGAAC TTTCTGATAA ACACGTTGTA GGTTTAAAGA ATGTAACAAT GGATGAACCT TTCTTCGTAG GGCACTTCCC AGGGGCTCCT GTAATGCCTG GTGTACTCCA AATAGAAGCA ATGGCACAAA CAGGAGGCGT ATTGATACTC AGTACCGTCC CCGACCCCGA AAATTACCTC ACTTATTTTA TGAAAATAGA CAATGTGAAG TTCAAGGTAC AAGTAGTGCC AGGGGATACC CTTATATTCA AGTTAGAATT GCTAACGCCT ATTCGCCGTG GTATTTGCCA TATGCAAGCT TACGCTTATG TGAACGGAAA GTTGGCTACT GAAGCTGAGC TAATGGCTCA AATTGTTAAA GTAAAATAA
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Protein sequence | MVKQNTLSKE ITLEGIGLHT GKQVKMVLKP APVGNGFTFV RTDLEGNPVV EADATYVAST ERGTVLEKKG VKIQTCEHIL AALVGMDLDN VIIELNSSEP PIMDGSSKYF VEAIEKAGIT PQDAERDEYI VKQVITYVNE ETGSEITLIP AEEYQVTTMV DFGTKILGTQ NAYLNKLSEF KTEIADARTF SFLHELEALL DHGLIKGGDL NNAIVYVDKE ISDSTMQKLK KIFNKDNISV KPNGVLDNLT LHYPNEAARH KLLDVIGDLA LVGTRIRGKV IATKPGHFTN TQFAKKLSKI IKNERRNNVP SIDINQPPLL NTTDIMKLLP HRSPFLLVDK IFELSDKHVV GLKNVTMDEP FFVGHFPGAP VMPGVLQIEA MAQTGGVLIL STVPDPENYL TYFMKIDNVK FKVQVVPGDT LIFKLELLTP IRRGICHMQA YAYVNGKLAT EAELMAQIVK VK
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