Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1754 |
Symbol | |
ID | 8368200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2091019 |
End bp | 2092236 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644984194 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003141860 |
Protein GI | 256820581 |
COG category | [R] General function prediction only |
COG ID | [COG1078] HD superfamily phosphohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0194685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTCAA GAAATAAGCT AAAAATTATC AACGACCCTA TTTATGGGTT TATCCATATC CCCAGCACTT TAGTGTTCGA CATTATTGAG CACCCCTATT TTCAGCGGCT CAGGCGTATC AATCAAATGG GACTTTCGTA TTTGGTATTT CCAGGGGCTA AACACACTCG TTTTGAGCAC GTATTGGGGT GTGTGTTCTT AATGCAGAAA ACAGTAGAGA TGCTCCGTTT CAAGGGAGTA CAAATCTCTG AAAAAGAGGC TGAAGGACTC TATATTGCCA TATTGTTGCA CGATATAGGG CACGGACCTT TTTCTCACGC AATGGAACAC AGCATTGTCG AAGGTATTTC TCACGAGGAA ATCTCGTTGC GCTTTATGCA AGAGCTTAAC AAGGTATTTA ATGGCAAATT AGATACCGCT ATAGCAATAT TTCAAGGTAC TTACCTTCGT AAGTTTATGC ATCAACTCAT CTCTGGTCAG TTAGATATGG ACAGAGCCGA TTACTTAAAA CGCGATAGTT TTTATACAGG AGTCGCTGAG GGGAATATAA ATTCTGAACG CCTTATCTCA ATGCTTAACG TACGCAACGA CGAATTAGTA GTCGAAGAAA AAGGCTTATA CTCGGTAGAG AAATTCCTAA TAGCTCGCCG ATTGATGTAT TGGCAAGTGT ATTTGCACAA AACTAGCGTA GTAGCCGAGC AGATACTCAT CAGGTTGCTC AATCGCGCCA AAGAGTTGGT GCAACAAGGG CAAGAACTGA CTATGTCCAC CGCTTTAGCT TTCTTTGTGA AAAACAAGAT ATCCAAAAAT AATTTCTCAC AAGAAGTACT TGAGATGTTT GCTTGTTTAG ACGATACAGA TATTATTTCA GCAATGAAAG AATGGCAGTT CCACCCCGAT GTAGTGCTTT CTAAACTCAG CAAAATGTTG CTCAACCGCG ATTTGCTAAA AATAAAAGTC CGCTTAAACG ATTTTGAAGA ACAGAAGATA AAGAGACTGC AGAAACTATC AGTTGCCAAA GGAGTAGAAG AAAAGGATAT TAAGTACTTT GTCTTTACAG GAGTGATGAC TAACAGAGCG TATAATCCAG GAAAGGAAAT AATTAAGATT CTTACCAAAA ATGGAAGAGT AGTAGATCTT ACTAAAACCT CTGAAGCTAT CAATTTAGAA CCTCTTTCAC AAGTAACTGA ACGATACTAT ATTTGCTATC CAAAGTAA
|
Protein sequence | MRSRNKLKII NDPIYGFIHI PSTLVFDIIE HPYFQRLRRI NQMGLSYLVF PGAKHTRFEH VLGCVFLMQK TVEMLRFKGV QISEKEAEGL YIAILLHDIG HGPFSHAMEH SIVEGISHEE ISLRFMQELN KVFNGKLDTA IAIFQGTYLR KFMHQLISGQ LDMDRADYLK RDSFYTGVAE GNINSERLIS MLNVRNDELV VEEKGLYSVE KFLIARRLMY WQVYLHKTSV VAEQILIRLL NRAKELVQQG QELTMSTALA FFVKNKISKN NFSQEVLEMF ACLDDTDIIS AMKEWQFHPD VVLSKLSKML LNRDLLKIKV RLNDFEEQKI KRLQKLSVAK GVEEKDIKYF VFTGVMTNRA YNPGKEIIKI LTKNGRVVDL TKTSEAINLE PLSQVTERYY ICYPK
|
| |