Gene Coch_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1753 
Symbol 
ID8368199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2088945 
End bp2091035 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content37% 
IMG OID644984193 
Productsulfatase 
Protein accessionYP_003141859 
Protein GI256820580 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCCA TTTTAGAAAG AATAAAACCT TTTACTTATA TAGCTAGCTT ATACCTTATC 
GTATCGTTTG TGATGCGCAT CGTTTTTATG GTGCACCCTA TCACTGCTAC CACATTTTCG
GTGTGGAGTG TGTTTAAGAT GCTTTTCATA GGCTTACTAT CCGACGCTTT TGTGATAGTA
TTGGCAAGTA GTATTTTAAT GCTTTATTTC CTATTTATTG CCAATGTAAA GTACAAAAAA
CCTTACGGAG GCATTATTTT AGGAGCATTT ATCCTCATAC TACTCTATAT ACAGTTTTAT
CCTAACAATA TATTTGCACA ATATGGGGGC GTGATTCCCG AAATCGCATT AGCTTTCTTC
GGCTTTAAAA CGTTGTGTTT TGCTCTTTTG CTCTTTTTAC CTAAGTACAG AGCCCAACTG
CGCAATGCAT TGTATTTTAT TACGTTGGCT ATCTATGTAT TTGCCATAGT GATGAATGCA
GTAAGCGAAT ATTTCTTTTG GAATGAGTTC GGGATTCGTT ATAACTTTAT TGCAGTAGAT
TACCTTATTT ATACCAATGA AGTGATAGGT AATATAATGG AGAGTTACCC CATAGTGCCC
TTATTTTCAG GGGTTTTTGT AGTAGTATTG GTAATTACTA TATATTTATT TCTCAAGACT
AAGAGTGCGC TAAAAACAAT ACCCACCCTC TTTGAAAAAA CGGTTATAGT AGTGCCCTAT
TTGCTGTTAG TGCTTATAGG AATGTGGAGA TTACCCCAGC TTGATGCTAT GGTTGCCGAA
AATACTTTTG CTCAAGAAAT ACAAAGCAAT GGTGTTTACA AGTTTTATTA CGCTTTTACT
CATAGTGAGT TAGATTTCTT TCAGTTTTAT CCTACCTTGC CAGAAAAAGA GGCTGAAAGC
ATTGTGCTCA AACAACTAAA TGCTCCTGCC CTCGAACGAC AGATTGTAGG CGATACTACC
GAAGTGCACC GTAATGTAGT ACTCATTTCA ATAGAAAGTC TTTCGGCGGA ATACCTTACA
ATGTATGGCA ATACTGATAA TCGTACGCCT TTCTTGGATA GCTTAGCTAA TAACAGCTTG
TTTTTTACTA ATTTGTATGC TACAGGTAAC CGTACAGTAC GTGGTCTGGA AGCGCTTACT
CTTTGTATTC CGCCTACTCC AGGGGAAAGT GTGGTGAAGC GCAAAGACAA TAAAGATAAG
TTTACCACGG GTAGCGTGTT CAAAAGTAAA GGTTATGATG TGAAATATCT CTATGGAGGC
GATAGTTATT TTGATAATAT GAAGGATTTC TTCAGTGGTA ATGGTTACGA TATTGTAGAT
AGCAAGAGCT TTACTCCAGA AGAAGTAACT TTTTCCAATA TATGGGGCGT TTGCGATGAA
GATATGGCAA ACAAAGCTAT AAAGGTGATG AATGAACAAG CTAAAGCAGG CAAACCATTC
TTTAATCACT GGATGACCGT GAGCAATCAC CGTCCGTTTA CTTATCCTGA AGGTAAAATT
GATATTCCTC CTACTGAGAA ACGACGTGCA GGTGGAGTAA AATATACCGA TTATGCTCTC
AAACGATTCT TTGAGATGGC AAAACAACAA GAGTGGTACA AAAACACTAT TTTTGTGATT
GTAGCCGATC ACTGTGCATC GAGTGCAGGT AGTACCGAAT TACCCTTAGA TGGCTATCGT
ATCCCTTGTT TTATTGTTGC CGATTTTATC ACTCCTAAGA AAATAGATAT AATGGTATCA
CAAATAGATG TGATGCCTAC CGTTTTTGGT TTGCTAAATT TCAATTATAT CTCTAAGTTC
ATAGGGCAAG ATGTACTAAA AGAAGGTTAT CAGCCACGCG CTTATATTGC TACTTATCAG
GATTTAGGTT ACTTAACCCC TGATAAACTC ACTATTATAT CACCTTTGAG AAAAACCACT
CAATACAGTT TGCACAAAGA AACAGAACAA CCCTCACAAG AGTATCCCTT GTTTTATGAG
CAAATAAAAG AAAATAATGT GAATAAGGAA CAAGCCGATG CTTGTATTGG TACTTATCAA
GCTACTGCCG AGTGGTTAAA AAACAAACAG TTCAATGCGC TCAAGAAATA A
 
Protein sequence
MKSILERIKP FTYIASLYLI VSFVMRIVFM VHPITATTFS VWSVFKMLFI GLLSDAFVIV 
LASSILMLYF LFIANVKYKK PYGGIILGAF ILILLYIQFY PNNIFAQYGG VIPEIALAFF
GFKTLCFALL LFLPKYRAQL RNALYFITLA IYVFAIVMNA VSEYFFWNEF GIRYNFIAVD
YLIYTNEVIG NIMESYPIVP LFSGVFVVVL VITIYLFLKT KSALKTIPTL FEKTVIVVPY
LLLVLIGMWR LPQLDAMVAE NTFAQEIQSN GVYKFYYAFT HSELDFFQFY PTLPEKEAES
IVLKQLNAPA LERQIVGDTT EVHRNVVLIS IESLSAEYLT MYGNTDNRTP FLDSLANNSL
FFTNLYATGN RTVRGLEALT LCIPPTPGES VVKRKDNKDK FTTGSVFKSK GYDVKYLYGG
DSYFDNMKDF FSGNGYDIVD SKSFTPEEVT FSNIWGVCDE DMANKAIKVM NEQAKAGKPF
FNHWMTVSNH RPFTYPEGKI DIPPTEKRRA GGVKYTDYAL KRFFEMAKQQ EWYKNTIFVI
VADHCASSAG STELPLDGYR IPCFIVADFI TPKKIDIMVS QIDVMPTVFG LLNFNYISKF
IGQDVLKEGY QPRAYIATYQ DLGYLTPDKL TIISPLRKTT QYSLHKETEQ PSQEYPLFYE
QIKENNVNKE QADACIGTYQ ATAEWLKNKQ FNALKK