Gene Coch_1748 details

Gene Information

• Locus tag: Coch_1748
• ID: 8368194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2084425
• End bp: 2085147
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 644984188
• Product: PorT protein
• Protein accession: YP_003141854
• Protein GI: 256820575

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGA AAACATTTAA AAAGAGTCTT ATAGGGTTGT TCTTATTTTT AGGAGCATTG 
AATTTGTATG GGCAAATCAA AGAGCCTATT ATGAACTTAG AACATTTTGA TGACAAACGC 
TTTCAATGGG GATACTATTT TGGTACCAAT GTGTTTGATT TCAAAATAGA TTACCGCGAC 
TTAAATTATC GCACAGCTAA TCTCCGAGAA ATACAAACTG ACCGTAAATT AGGTTTTAAC 
GTAGGTCTTA CAGGCTCTGT GCGCTTAGTG AAACATCTCG ATTTGCGAAT TGAGCCAGGT 
TTGGTGTACA ACAAGCGTAT TCTTATCTTC CCTGGATTCT CTGATTCGAG AGATTCGATG 
CGCGATGTTC CTTCTACATA TATTTATATT CCGTTATTGC TAAAGTATAG CGCTAAGCGC 
TGGTATAACG TAAAACCCTA CGTAACGGCA GGAGCTTCTA TGGTGTTTAA CTTGAGTAGT 
AATGCGAATC TAAATGTTGA TAATTCCGAA AAGACTTTCC GTGCTACAAG AAATGTTTTC 
TTCTATGAAT TAGGTTTAGG TATTGACTTC TACACTCCTT ATTTTAGAGT CTCTCCTTCT 
CTGAGAGCCT TATTTTCAGT TAATAATGAG TTGATACCCG ATAATAATCC CAATAGCCCT 
TGGACAAGTA ACCTTAATGG TTTAAAGAGC CGTGGTTTCT TATTAAATCT AAACTTCGAA 
TAA 

 

Protein sequence

MNKKTFKKSL IGLFLFLGAL NLYGQIKEPI MNLEHFDDKR FQWGYYFGTN VFDFKIDYRD 
LNYRTANLRE IQTDRKLGFN VGLTGSVRLV KHLDLRIEPG LVYNKRILIF PGFSDSRDSM 
RDVPSTYIYI PLLLKYSAKR WYNVKPYVTA GASMVFNLSS NANLNVDNSE KTFRATRNVF 
FYELGLGIDF YTPYFRVSPS LRALFSVNNE LIPDNNPNSP WTSNLNGLKS RGFLLNLNFE