Gene Coch_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1743 
Symbol 
ID8368189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp2079943 
End bp2080512 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content39% 
IMG OID644984183 
Producthypothetical protein 
Protein accessionYP_003141849 
Protein GI256820570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.50301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCTCC TATCGCAAAT CAGTATAAGC AAATATCTTT TCTATAAAGC CATAGAAAAT 
CGCAATTTCA TTTACTTTAA ATTCGCTTTT TGTTCATTTA TTCTTTATCC ACCCTTGTGG 
CTCGCAGCGT TATTTGTTCG TTTTAGGTCT ACTTTAGCTT CGCTTTCTCT TCAAATAGGT 
CTTGTCTTTC AGATTGATAG TCTTCACCAA TTTCTCTTTA AGGCTTGTCC CCCTTCGGGG 
GTTCGGGGGC TTTCGTCATT CGTCATTCAT CTTTTCCTTC ACTTTTCCTT CACTTTTCCT 
TCACTTTTCC TTCACTTTTC CTTCACTTTT CCTTCATATT TTCTTCGTTC ATTCTTCGTT 
CATTCTTCGT TCATTGTTCG TTCATTGTTC GTCTTTTGTT CGTCTTTTGT TCGTCATTTG 
CTCGTCATTT GTTCGTCATT TGTTCGTCAT TTGTTCGTCA TTTGTTCGTC TTTTCTTCGT 
CTTTTGTTTA TCTGCCCGTG CGGCTCGCAC CGTCTTTCCT ATAAGCTCTC CATATCTACA 
TTATTTCATT CTCTCGCCCC CATTTGCTAA
 
Protein sequence
MALLSQISIS KYLFYKAIEN RNFIYFKFAF CSFILYPPLW LAALFVRFRS TLASLSLQIG 
LVFQIDSLHQ FLFKACPPSG VRGLSSFVIH LFLHFSFTFP SLFLHFSFTF PSYFLRSFFV 
HSSFIVRSLF VFCSSFVRHL LVICSSFVRH LFVICSSFLR LLFICPCGSH RLSYKLSIST 
LFHSLAPIC