| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1723 |
|---|
| Symbol | |
|---|
| ID | 8368169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2056031 |
|---|
| End bp | 2056408 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644984163 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_003141829 |
|---|
| Protein GI | 256820550 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.136811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA TCATTTTTAC AGAAAAAGCG CCAGCACCTA TTGGTCCTTA CACACAAGCC
GTGAAAGCTG GCAACACACT CTACGTATCA GGACAAATAC CAGTAAATCC TGCAACGGGA
GAAGTAGTGA AAGGCATAGA AGCCGCTACC AAACAAGTAA TGGAAAACCT CAAAGCTATC
CTTACCGAAG CAGGAGCTAC TTTTGAGAAT GTAGTAAAAA CCACTATTTT CTTAGCTGAT
ATGGGGCAAT TTGCGCAAGT AAATGGCGTA TATGCACGCT ATTTCAACGA GGCAACAGCA
CCTGCACGCG AAACCGTACA AGTAGCACAA TTACCTAAAT CCGTAGAAGT AGAGATTTCT
TGCATTGCTG TATTGTAG
|
|---|
| Protein sequence | MKHIIFTEKA PAPIGPYTQA VKAGNTLYVS GQIPVNPATG EVVKGIEAAT KQVMENLKAI
LTEAGATFEN VVKTTIFLAD MGQFAQVNGV YARYFNEATA PARETVQVAQ LPKSVEVEIS
CIAVL
|
|---|
| |