Gene Coch_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1716 
Symbol 
ID8368162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2049974 
End bp2050465 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content41% 
IMG OID644984156 
ProductATP synthase F0, B subunit 
Protein accessionYP_003141822 
Protein GI256820543 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000198199 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAG CACACCCCGA AAGTTTACTA TTCTGGAATA CTCTCATATT TCTGATATTG 
CTTTTCCTCT TAGCAAAATA CGCTTGGAAG CCCATAATGA ATGCGGTAAA GCAACGCGAA
GACTCTATCA ATAAGGCTTT GGAAGCTGCT GAAGAAGCTC AAAAACAAAT GGCAAATCTC
AAAGCCGATA ATGAACGTCT TTTAGCTGAA GCACGTGCCG AGAGAGATGT AATCTTGAAA
GAGGCAAGAG ATGTTAAGGA TAAAATCGTA ACAGAAGCCA AAGAAGAAGC ACAACGCGAA
GGCGAAAAGC TTATCAAACA AGCGCAACAA GCGATTGACA GTGAGAAGAA AGTAGCGTTG
GCACAACTGA AAGACCAAGT GGCAGCTCTT TCTGTTGAAA TGGCTCAGAA AGTGATGATG
AGCGAACTCT CAGACGAGAA GAAACAAACT GCCCTCATCA ACGATTATCT AAAAGGTGTT
ACGTTAAACT AA
 
Protein sequence
MNLAHPESLL FWNTLIFLIL LFLLAKYAWK PIMNAVKQRE DSINKALEAA EEAQKQMANL 
KADNERLLAE ARAERDVILK EARDVKDKIV TEAKEEAQRE GEKLIKQAQQ AIDSEKKVAL
AQLKDQVAAL SVEMAQKVMM SELSDEKKQT ALINDYLKGV TLN