| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1708 |
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| Symbol | ruvB |
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| ID | 8368154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2042313 |
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| End bp | 2043380 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984148 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_003141814 |
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| Protein GI | 256820535 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.780962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATACTAT CTCCTAACTC CTATCCCTTA AATCCTAAAA GCTTGAATAA AAACTTAGAC
CCAAATAAAG AAAATTATTC GGCGCAAGAA CTCGATATAG AAAGAGCCTT GCGCCCTTTG
TCGTTTGATG ATTTTGCAGG GCAAGAAGCA GTTTTAGAAA ACCTAAAAGT ATTCGTAAAA
GCTGCTAATA TGCGTCACGA AGCACTTGAC CATACCCTTT TTCACGGACC TCCTGGACTT
GGAAAGACTA CTCTCGCTCA TATTTTAGCT AACGAATTGG GCGTAGGTAT CAAAATTACT
TCAGGCCCTG TGCTTGATAA ACCTGGTGAT CTGGCAGGAT TACTCACCAA TTTGCAAGAG
CGGGATGTAC TTTTTATCGA CGAGATACAC CGCTTGAGTC CAGTAGTAGA AGAGTATCTC
TACTCGGCTA TGGAGGACTA CAAGATTGAT ATAATGATAG AATCAGGGCC TAACGCCCGC
ACCGTACAAA TCAATCTCAA TCCATTTACG CTTATAGGGG CGACCACCCG TTCAGGGCTA
CTTACAGCTC CTATGCGTGC ACGTTTTGGT ATTCAAAGTC GATTGCAGTA TTATTCTACC
GAACTTTTGG CAGATATCGT TCGGCGCAGT GCTTCTATCC TTAAAGTACC TATTTCTATG
GAAGCTGCTA TAGAATTAGC GAGCAGAAGT AGAGGTACCC CGCGTATTGC GAATGCTCTT
TTGCGCCGTA TTCGTGACTT TGCTCAGATA AAAGGCAATG GTGAAATAAA TATTGCTATT
ACCCGTTTCG GACTTAAAGC CTTAAATGTA GATGCTCACG GATTAGACGA GATGGACAAC
AAAATTCTCT CAACCCTTAT TGATAAGTTC AAAGGAGGAC CTGTGGGAAT TACCACTTTG
GCGACTGCCG TTTCCGAAAG TGCTGAAACT ATTGAAGAGG TGTATGAACC TTTCCTCATT
CAAGAAGGAT TTATCGTGCG TACTCCTCGC GGACGCGAAG TAACCGATTT AGCTTATAAA
CACTTAGGTA GAGTGAATCC TGCAAGGCAA GGCACTTTAT TTGATTAA
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| Protein sequence | MILSPNSYPL NPKSLNKNLD PNKENYSAQE LDIERALRPL SFDDFAGQEA VLENLKVFVK
AANMRHEALD HTLFHGPPGL GKTTLAHILA NELGVGIKIT SGPVLDKPGD LAGLLTNLQE
RDVLFIDEIH RLSPVVEEYL YSAMEDYKID IMIESGPNAR TVQINLNPFT LIGATTRSGL
LTAPMRARFG IQSRLQYYST ELLADIVRRS ASILKVPISM EAAIELASRS RGTPRIANAL
LRRIRDFAQI KGNGEINIAI TRFGLKALNV DAHGLDEMDN KILSTLIDKF KGGPVGITTL
ATAVSESAET IEEVYEPFLI QEGFIVRTPR GREVTDLAYK HLGRVNPARQ GTLFD
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