Gene Coch_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1703 
Symbol 
ID8368149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2036805 
End bp2037812 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content38% 
IMG OID644984143 
Productasparagine synthetase AsnA 
Protein accessionYP_003141809 
Protein GI256820530 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2502] Asparagine synthetase A 
TIGRFAM ID[TIGR00669] aspartate--ammonia ligase, AsnA-type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATTA TTATCCCTAA GAACTACTCA ACTCCCTACG GAATAATGGA TACCGAGCGG 
GCTATAAAAC TAATCAAAGA CTCTTTTGAG CAGGCTTTGG CGCGTGCTTT AAACCTCACA
CGTATTTCGG CTCCTTTATT TGTGAAGCGT TCCACAGGTC TTAATGATAA CCTCAACGGA
ATAGAACGCC CTGTTAGCTT CGAAATGAAA GATTACAAAG GTGAAGTGAT AGAAATTATC
CATTCGCTTG CTAAATGGAA ACGTTTAGCC CTGAAACGCT ATGGTATTAA AGCAGGCGAA
GGCATTTATA CTGATATGAA TGCTATCCGT AGAGATGAAG AATTAGATAA TACCCATTCT
ATTTATGTAG ACCAATGGGA TTGGGAAAAA GTGATAACTC CCTCTCAGCG CACTTTATCT
TATCTCAAAC AAACCGTAAA ACAGCTATAT AATGTCTTTC TTGAAACAGA AGCGCTTTTA
GTAAAAGAAT ATAACAAGTG TAAGGTTTTT CTACCTCGTG AAGTAACTTT CATAAGTTCA
CAAGAATTAG AAGATATGTA TCCTAACTTA TCACCTTCTG AACGTGAACA TAATTTCACC
AAAGAAAAAG GAGCTATTTT TATTACTCAA ATAGGCAAAA CACTTCTTTC AGGAAAAAAA
CACGACAATA GAGCCCCCGA TTATGACGAT TGGGAACTCA ATGGCGACCT TATTATTTGG
AATCCTGTAC TAAACAGCGC TTTAGAACTT TCTTCAATGG GTATTCGAGT AAACGAAGCC
TCTCTACATT CTCAACTGAA AGCTTCAAAA TCAGAAGAAC GTGAGAAGTT AGAATACCAT
CAGATGCTAT TACGCGGTGA ATTACCCTTA ACTATTGGGG GAGGTATCGG TCAATCTCGT
ATCTGTATGC TACTTTTGCA AAAAGCTCAT ATCGGTGAAG TACAAGCATC CATATGGACA
GATGATATGG TTCAGTTATG CGATAAGAAC GGAATTCATT TATTGTAA
 
Protein sequence
MTIIIPKNYS TPYGIMDTER AIKLIKDSFE QALARALNLT RISAPLFVKR STGLNDNLNG 
IERPVSFEMK DYKGEVIEII HSLAKWKRLA LKRYGIKAGE GIYTDMNAIR RDEELDNTHS
IYVDQWDWEK VITPSQRTLS YLKQTVKQLY NVFLETEALL VKEYNKCKVF LPREVTFISS
QELEDMYPNL SPSEREHNFT KEKGAIFITQ IGKTLLSGKK HDNRAPDYDD WELNGDLIIW
NPVLNSALEL SSMGIRVNEA SLHSQLKASK SEEREKLEYH QMLLRGELPL TIGGGIGQSR
ICMLLLQKAH IGEVQASIWT DDMVQLCDKN GIHLL