| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1689 |
|---|
| Symbol | |
|---|
| ID | 8368135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2018505 |
|---|
| End bp | 2019437 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644984129 |
|---|
| Product | Lactate/malate dehydrogenase |
|---|
| Protein accession | YP_003141795 |
|---|
| Protein GI | 256820516 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.444612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTTA CAGTAGTAGG CGCTGGTGCC GTAGGAGCAA GTTGCGCAGA GTACATTGCT
ATTAAAGACT TCGCGTCTGA AGTAGTCTTA ATTGACATCA AAGAAGGTTT TGCCGAAGGT
AAGGCTATGG ATTTGATGCA AACCGCTTCC CTCAATGGGT TTGACACTCG TATTGTGGGG
GTAACCAATG ATTATTCAAA AACAGCAGGC AGTGATGTAG CTGTGATTAC CTCAGGTATT
CCTCGTAAAC CAGGTATGAC TCGTGAAGAG CTTATCGGTA CCAATGCAAA CATTGTGAAA
TCGGTTGTAG AACAATTGGT AAAATACTCA CCTAATGTGA TTGTGATTGT AGTAAGCAAC
CCTATGGATA CTATGGCTTA TTTGGTACAT AAAGCTACTA AGTTGCCTAA GAACCACATT
ATTGGTATGG GTGGAGCACT CGATAGCGCT CGCTTTAAAT ATCGTTTGGC AGAAGCGCTC
AACAGTCCGA TTTCAGACGT AGATGGTATG GTAATCGCTG CTCACAGCGA TAGCGGTATG
TTACCTCTTA CTCGTTTGGC AAGCTATCGT GGTGTGCCTG TAACTGAGTT TTTAAGTGCT
GACCGCCTCA ATCAGGTTGC TGAAGACACT AAAGTAGGTG GCGCGACTCT TACTAAACTC
TTGGGAACTT CGGCTTGGTA TGCACCAGGG GCTGCCGTAT CAGCTTTAGT ACAAGCAATC
GCTTGCGACC AAAAGAAACT CTTCCCTTGC TCAGTATTGC TCGAAGGAGA ATACGGACAA
AAGGATGTGT GTGTAGGAGT GCCTGTAATC ATCGGTAAAA ATGGTGTAGA AAAAATTGTA
GAGGTAAAAC TCAACGATGC TGAAAAAGCC AAATTTGCTG AAAGTACCGG AGCAGTACGC
GAAGTAAACA AAGCGTTAGC AAACGTATTA TAG
|
|---|
| Protein sequence | MKVTVVGAGA VGASCAEYIA IKDFASEVVL IDIKEGFAEG KAMDLMQTAS LNGFDTRIVG
VTNDYSKTAG SDVAVITSGI PRKPGMTREE LIGTNANIVK SVVEQLVKYS PNVIVIVVSN
PMDTMAYLVH KATKLPKNHI IGMGGALDSA RFKYRLAEAL NSPISDVDGM VIAAHSDSGM
LPLTRLASYR GVPVTEFLSA DRLNQVAEDT KVGGATLTKL LGTSAWYAPG AAVSALVQAI
ACDQKKLFPC SVLLEGEYGQ KDVCVGVPVI IGKNGVEKIV EVKLNDAEKA KFAESTGAVR
EVNKALANVL
|
|---|
| |