| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1687 |
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| Symbol | |
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| ID | 8368133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2015117 |
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| End bp | 2016667 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644984127 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_003141793 |
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| Protein GI | 256820514 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0930816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC GAACGCCATT CATAAAGAAA CTAATAGCTC CTGTATTGTT TATCATTACA
GTAGCCCTCT ATTTCAATGT TAATTATACT ACAGCTATTA ATTTATCTTC ACTTACTTCA
AAGATAGCAA ATATAGAGAA TAAAGAAGGA ATCGATAAAG ATGCCTTCAA GGAAGCTATT
CCCCAGCCTT TGGCATATGC TGCAGGTGAT GATGACTCTC CTAAGGAGTA CAATAATCTG
TACAATGCCT CAGCCTTGAA CCCTTTTTTC GAAAAGCTTG CTGCTTTGGA AAACTTGAAA
GATAGGAAGA TTAATATTGT TCATATTGGC GACTCACACA TTCAAGCCGA TGTAATGACT
AATATTGTAA GACAACGCTT GCAAGAAGAG TTTGGAAATG CTGGTTTAGG TTTGGTATTC
CCGTATTCAC TTATTAGAAC TAATGGGGGA CATAATGTGA GCTTTACTTC CAATATCTCT
TGGAATAGTG AGAAGAATAC TTCTTCTGCA ACTGTTGGTA TTACAGGTTA TTCTCTTTCT
ACCAGTAACA AGAATTTTGT TATTGAACTG GATTTGAAAA ATAAAAACTA CACCTTTAAT
ACGGTAAAAA TTATTACCCC TAATAACGAA CGTTTGTTCG AATTGGCTAC CAATGTAGGT
AAAGTAGCTC GTTTGAGACC TAGTGTACCT AAAACACTTT CACACAAAGT AGAGCAAGGA
CAAACACTTT ATGGTATTTC AAAGAAATAT CACACTTCAG TAGAAAAAAT ACAACAAGCT
AATAACTTAA AAAGCGCACA AATAAGAATA GGGCAAGTAT TGCGTATCCC TACTAAAGAG
ATGGTAGCTT CTACTCCTAA ACAAAAAGTA GATTTATCTA ATGCTACCAT TTTAAACGGT
AATTCTTTAT ATAGCTATTA TTCTTATGAT AATCTAACTC CTTCCGATAA GGTTTATCTC
ACAGCCAATA CCGAGAGCTC TTCATTTACG CTTAATGGAA TTGTCTTAGA AAATGATAAA
AACGGAGTTA TATATCACAG CATAGGGGTA AATGGAGCTC ATTTCTCTGA TTATAACAAA
TCACAGCTCT TTTTCGACCA AATCAGAGCC TTAGAACCCG ATTTAATCAT TATATCTTTG
GGTACTAATG AAGCTTATTG TCGAATGTCA GCAACTCGTT ATGACGAAGA GGTGAATAAA
TTCATAAAAG CAATTCGCTC TCAATATGGT CAATGTCCTA TATTGCTTAC TACACCTCCG
CCTTCTCTTT ACAAAAAGAA AAGTCCTAAC CCCTTGTGTA TGGAATACGC CGATACTCTC
ATCGATAATT CAGTAAAAGA TAATTACAGT GTTTTCGACC TTTATCGAGC TGTAGGAGGA
AATGAAGCGA TTCAACGCTT TATTCAGCAA AATCTTATTG CTGGTGACCG CATACATTAC
ACAAGAAGTG GCTATACTGA GCAAGGCGCT CTCTTTTATG ATGCTTTTAT GAGCAATTTC
TTGAATTATA AAAAACAATA TAAACTATCT TTAAAACCCT ATCTAAATTG A
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| Protein sequence | MKKRTPFIKK LIAPVLFIIT VALYFNVNYT TAINLSSLTS KIANIENKEG IDKDAFKEAI
PQPLAYAAGD DDSPKEYNNL YNASALNPFF EKLAALENLK DRKINIVHIG DSHIQADVMT
NIVRQRLQEE FGNAGLGLVF PYSLIRTNGG HNVSFTSNIS WNSEKNTSSA TVGITGYSLS
TSNKNFVIEL DLKNKNYTFN TVKIITPNNE RLFELATNVG KVARLRPSVP KTLSHKVEQG
QTLYGISKKY HTSVEKIQQA NNLKSAQIRI GQVLRIPTKE MVASTPKQKV DLSNATILNG
NSLYSYYSYD NLTPSDKVYL TANTESSSFT LNGIVLENDK NGVIYHSIGV NGAHFSDYNK
SQLFFDQIRA LEPDLIIISL GTNEAYCRMS ATRYDEEVNK FIKAIRSQYG QCPILLTTPP
PSLYKKKSPN PLCMEYADTL IDNSVKDNYS VFDLYRAVGG NEAIQRFIQQ NLIAGDRIHY
TRSGYTEQGA LFYDAFMSNF LNYKKQYKLS LKPYLN
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