| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1672 |
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| Symbol | |
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| ID | 8368118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1999609 |
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| End bp | 2000688 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984112 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003141778 |
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| Protein GI | 256820499 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAATTACTAC AGTTATCATA ATAGTCCTTG TAGGATTAAT GGGGCTCCGC
CTATATTCTA ACAAACAAAA AAATGCTGAA GAGGTAGCTA TTGTAGCCCA AAAAGAAGCC
CAAGTAGCCG TACGTGCTGC CAAAGTAACA GAAGAAAAAG TAGCCGACCT TTTTACGGCT
AACGGTACTT TTGTAGCGGA ACAAGACCTG AATGTATCTT CAGAAGTAGG AGGACAAGTC
ATAAAAATTT ACGTAAAAGA GGGTGATTTT GTGAGAGCAG GGCAAGTATT GGCACAAACA
AAAGCCGACA GAACCAATGT GCAGTTAGAC AATGCCAAAG CGGTACTCGA AACTGCAAAA
TCGGATTTAA AGCGCTTTGA AAGTGCTTAC CAAACAGGAG GAGTTACCGC TCAACAATTG
GAACAAGCGC GCTTGCAACT CAAAAACGCC CAAGCAAACT ACAATTCGGC AGCTATTGTA
TCGGGTGATA CAGCGGTACG TAGTAAAATC AACGGGATTG TAACTAGCAA AGAGGTAGAA
GAAGGAACAC TTGTAAGTGC CGGACAGACG TTATTCAACG TGGTAAATAT CGACAATTTG
AAATTGAAAA TTACCGTAGA TGAAAGTCAA GTAGGAGAAC TAAAAGTGGG GGATGTTGTT
AAAATAAAAC CTAGTACTTC CTCAGAATTA ATAGACGGAA AGATTATTTT TATCGCACCG
AAATCTAATG GAGCTCTCAA ATTCCCCGTA GAAATATTGG TAGCCAACAA AGATAAAAAG
CTAAAAGCGG GAATGTATGC GACTGCACAG TTCGGCAGTG GTAATGATGA GGTTACAGCT
CTTGTGGTAC CTCATTCTGC TTTCGTGGGT AGTGTGAGCC AAAATAAAAT TTTCAAAATA
GTAAGTAGCA AAAATGCTAA AGGTCAGGAG GTGCTTAAAG CTGAAATGGC AAATGTGAAA
AGCGGTCGCA ATTTTGGTGA TAAGGTAGAA ATCATCAGCG GACTTACTGT TGGTGAAGAA
GTGATTACCA GTGGACAAAT TAATATAGAT AACGGAACAC CTGTGAAAAT AGTAGAGTAA
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| Protein sequence | MKKIITTVII IVLVGLMGLR LYSNKQKNAE EVAIVAQKEA QVAVRAAKVT EEKVADLFTA
NGTFVAEQDL NVSSEVGGQV IKIYVKEGDF VRAGQVLAQT KADRTNVQLD NAKAVLETAK
SDLKRFESAY QTGGVTAQQL EQARLQLKNA QANYNSAAIV SGDTAVRSKI NGIVTSKEVE
EGTLVSAGQT LFNVVNIDNL KLKITVDESQ VGELKVGDVV KIKPSTSSEL IDGKIIFIAP
KSNGALKFPV EILVANKDKK LKAGMYATAQ FGSGNDEVTA LVVPHSAFVG SVSQNKIFKI
VSSKNAKGQE VLKAEMANVK SGRNFGDKVE IISGLTVGEE VITSGQINID NGTPVKIVE
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