Gene Coch_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1671 
Symbol 
ID8368117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1999043 
End bp1999600 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content40% 
IMG OID644984111 
ProductSUA5/yciO/yrdC domain protein 
Protein accessionYP_003141777 
Protein GI256820498 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATA ACCATCTGAT AACTGAAATA TTAAAGGCAG GAAAGGTAAT TCTATACCCC 
ACCGATACCG TTTGGGGTTT GGGGTGTGAT GCTACAAATC CTGAAGCGGT AGCTAAGATT 
TTCCAAATAA AACAACGCAG TGAGAGCAAA AGCCTCATCA TTTTAGTGAG TGATACAGAG 
ATGTTACAGC ACTATGTAAC AGATATACCT CCTAAGGTGC TTACCTATCT TCAAACCTTG 
CAAGAGCCTA CCACTATTAT TTATAGTCAC CCTTTGCATT TGGCTAAGAA CGTGATAGCT 
GCTGATAATA CAGTGGCCAT TAGGGTCGTG CAAGATGTGT TCTGCCAACA GATGATTGCC 
GATTTTGGCA AACCTATAGT CTCTACCTCT GCTAATATCA GTGGAGAGCC AACACCTTTG 
TATTACCAAC TCATTAATCC CCAAATTATT GCGCAATGTG ATTATGTAGT ACCTTACCGT 
CAAGACGATA CTCAAATAAA AAATCCCTCA CGTCTGATTA GGTTTGATAC AGACGGAGAG 
ATTCAAATAT TAAGATAA
 
Protein sequence
MANNHLITEI LKAGKVILYP TDTVWGLGCD ATNPEAVAKI FQIKQRSESK SLIILVSDTE 
MLQHYVTDIP PKVLTYLQTL QEPTTIIYSH PLHLAKNVIA ADNTVAIRVV QDVFCQQMIA 
DFGKPIVSTS ANISGEPTPL YYQLINPQII AQCDYVVPYR QDDTQIKNPS RLIRFDTDGE 
IQILR