| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1659 |
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| Symbol | |
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| ID | 8368105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1984479 |
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| End bp | 1985438 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644984099 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_003141765 |
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| Protein GI | 256820486 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATAA AGATACTTGC AAACGATGGA ATTTCCGATT CAGGAAAAGA AGCGTTAGAA
AAAGAAGGTT TTGAAGTTAT CACTACTAAG GTAGCTCAAA ACCAATTGAT AGACTATATA
AACAAACACG CAATCGATGT GCTCTTAGTG CGTTCAGCCA CACAAGTGCG AAAAGATATC
ATCGATAGCT GTCCGTCACT CAAACTCATC GGTAGAGGAG GCGTAGGAAT GGACAATATA
GATGTGGCAC ACGCCAAAAG CAAAAACCTA CACGTGATTA ATACCCCAGC CTCTTCGGCT
AATTCGGTAG CCGAGCTCGT TTTTGCTCAC CTTTTCAGTG GCGTACGTTT TCTACACGAT
GCCAACCGCA ATATGCCTTT GGAAGGCGAC ACTCAGTTTA ACGAACTCAA AAAAAACTAT
AACAATGGCG CCGAATTGCG CGGTAAAACC ATAGGCATTA TAGGGTTCGG ACGTAGCGGA
CAAGCGGTAG CTCGCATTGC TATCGGTTTA GGAATGAACG TAATGGCTTA CGACCCCAAA
GTAACTGAGG CAGTAATAAC CCTCGACTTT TTCGACGGAC AAACCTTGCC TTTCACTATC
AAAACCGTAG AAAAAGAACA CCTACTGGCA AAAGCTGATT TTATCACTCT CAACAACAGC
CCAGCAGAAG GAGGTTATAT ACTCGATGCA AAAGAGTTTG CCTTGATGAA AGATGGTGTA
GGAGTCATCA ATTTAGCACG TGGAGGTGCT TTAAATGAAG TAGCCCTTAT AGAAGCCTTA
GATAGTGGCA AAGTAGCTTT TGCAGGTTTA GATGTATTTG AAAACGAACC CAACCCCGCT
ATACAAGTGT TAATGCACCC TCAGGTATCG CTTACCCCAC ACATAGGGGC AGCTACTAAC
GAAGCTCAGA ACCGCATAGG TTTTGAGTTA GCCTCACAAA TTATAACCTT ATTTAAATAA
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| Protein sequence | MAIKILANDG ISDSGKEALE KEGFEVITTK VAQNQLIDYI NKHAIDVLLV RSATQVRKDI
IDSCPSLKLI GRGGVGMDNI DVAHAKSKNL HVINTPASSA NSVAELVFAH LFSGVRFLHD
ANRNMPLEGD TQFNELKKNY NNGAELRGKT IGIIGFGRSG QAVARIAIGL GMNVMAYDPK
VTEAVITLDF FDGQTLPFTI KTVEKEHLLA KADFITLNNS PAEGGYILDA KEFALMKDGV
GVINLARGGA LNEVALIEAL DSGKVAFAGL DVFENEPNPA IQVLMHPQVS LTPHIGAATN
EAQNRIGFEL ASQIITLFK
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