Gene Coch_1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1655 
Symbol 
ID8368101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1980879 
End bp1981250 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content39% 
IMG OID644984095 
Productiojap-like protein 
Protein accessionYP_003141761 
Protein GI256820482 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAAGG AAATATCATC AAATCAGCTT ATTAGTAATA TTATAGCTGG TATAGAAAAA 
GTAAAAGGAA CCGATATTAC CATTATGGAT TTGCGCGAGG TAGAGAATAC CGTGTGCGAT
TATTTTATTT TGTGCAATGG ATCTTCTAAT ACCCAAGTGT CGGCTATCTC TGGTGCTATC
CAAAAGGTAG TGAGTCAAGC CGAAGGTCAT CAACACCCGT GGCACGTAGA AGGTGAAGCT
AATGCCGAGT GGGTACTCAT CGATTATGTG GATGTAGTGG TGCATATCTT CCAAACAAAA
ATACGTGAGC ATTACGACCT CGAAGGACTT TGGGGAGACG CTAAAATTAT CAACTTAGAA
ACTAACTATT AA
 
Protein sequence
MNKEISSNQL ISNIIAGIEK VKGTDITIMD LREVENTVCD YFILCNGSSN TQVSAISGAI 
QKVVSQAEGH QHPWHVEGEA NAEWVLIDYV DVVVHIFQTK IREHYDLEGL WGDAKIINLE
TNY