Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1643 |
Symbol | |
ID | 8368089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1961546 |
End bp | 1962325 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644984083 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003141749 |
Protein GI | 256820470 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTATCAC TTCGTCCCTA TTATCACCCT ATACAATCGG TTATTCCTGC GGAAGAAAAA GAGGTTACTT ATACTGAGTT TCTTCCGTGT GAGGCTTTGC GTTCGTTTAT CTATTGCTAT TGGGAACTGA AATCTCCTCC GCGTAACACA CCTTTTTGCT ACCGAGTAGT TGCCGACGGT TGTATAGATC TATTTTTTGA CTGCAACACC CCGCAGATGA GTTCCCTTAT GGGCTATTGC AATACATACG TAGAGTTTCC CATAACGGGT GCCTTTCACT ATGTCGGAGT GCGCTTTCTG CCTAGTGTCT TTCCGCTACT TTTTGGTCAA GATGCTTTTG AAATCAGCGC ACAAGAAATC CCTTTGCGTG AGGTAGTACC TGCGTTGGCT ACTTTTATAG CCGAGCAGTT GGAAACTCCC TTTTCGTTAG CTACCATTGC ACAACGTTTG GATAACTATT TTCTCCGTCA CCTATCACAA CGCCCTTTGC AGATGGATAA GCGCTTTTTC TCGGCACTTT TGCAGATATT GCAAAGCAAA GGTAGCATAC ACATCAGTGA GTTGGATACC GGCATCAGCA CCCGACAGTT GCGCCGCCTT TTCGACTACT ACATAGGCGA TAGTCCTAAG ACTTTTAGCA ATATTGTGCG CTTCCAACAT ATATTAAGTG CAAAAGCCTA TCACAACCAT TCTTTTTTAG ACACTTATTA CGACCAAGCC CACTTTATCA AATCGTTTAA AACATTCTAT GGCGATACCC CAAGCAAGGT GTTAGGCTGA
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Protein sequence | MLSLRPYYHP IQSVIPAEEK EVTYTEFLPC EALRSFIYCY WELKSPPRNT PFCYRVVADG CIDLFFDCNT PQMSSLMGYC NTYVEFPITG AFHYVGVRFL PSVFPLLFGQ DAFEISAQEI PLREVVPALA TFIAEQLETP FSLATIAQRL DNYFLRHLSQ RPLQMDKRFF SALLQILQSK GSIHISELDT GISTRQLRRL FDYYIGDSPK TFSNIVRFQH ILSAKAYHNH SFLDTYYDQA HFIKSFKTFY GDTPSKVLG
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