Gene Coch_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1625 
Symbol 
ID8368071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1939760 
End bp1940758 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content39% 
IMG OID644984065 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003141731 
Protein GI256820452 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAA AAATTGGAAT TAACGGTTTC GGACGTATTG GACGTCTCGT ATTCCGTGCT 
GCTTATGAAA GAGCCGACGT AGAAATCGTT GGTATTAACG ACCTTTTGGA TGTAGATTAC 
ATCGCTTATC TTTTGAAATA CGATTCAGTT CACGGAACTT TTAAAGGTGA TGTGAAAGTA 
GAAAATGGTC ACTTAGTAGT AGATGGCAAA AAAGTGCGTA TCACTGCTGA AAAAGACCCT 
AACAACCTTA AATGGAACGA AGTACACGCC GATGTAGTTG CTGAATGTAC TGGTATCTTC 
ACTACCTTAG AAAAAGCACA AGCTCACATC AATGCAGGGG CTAAAAAAGT AGTTATTTCT 
GCTCCATCAG CTGATGCTCC TATGTTTGTA ATGGGTGTGA ACCACAAATC AGTAAAACCT 
ACTGATACTA TCGTGTCTAA CGCTTCTTGT ACTACCAACT GTTTATCTCC TGTTGCTAAA 
GTATTGAATG ATAACTTTGG TATTGAAGAA GCCTTAATGA CTACTGTTCA CGCTACAACA 
GCTACTCAAT TGACTGTAGA CGGTCCTTCT AAAAAAGACT GGAGAGGTGG ACGTTCAGCA 
CTTTGCAACA TTATCCCTTC TACTACTGGT GCTGCTAAGG CTGTAGGTAA AGTAATCCCT 
GAATTGAATG GTAAACTTAC TGGTATGGCA TTCCGTGTGC CTACTGCTGA TGTTTCGGTA 
GTAGATGTTA CCGTTCGTAC TAAAAAGGCA ACTACCTTAG AAGAAATCAA TGCTGCTATG 
AAAAAAGCAT CAGAAGGTGA ATTGAAAGGT ATACTTGGAT ACACTGAAGA CCTTGTAGTT 
TCTCAAGATT TTGTAGGTTG CAAACTTACT TCTATTTACG ATGCAAAAGC TGGTATCGGT 
TTGAGTGCTA ACTTCTTCAA AGTAGTTTCT TGGTACGATA ACGAGACTGG TTATTCAAAC 
AAATTGGTAG ATTTGGCACA GCACATTGCT AAATTGTAA
 
Protein sequence
MSVKIGINGF GRIGRLVFRA AYERADVEIV GINDLLDVDY IAYLLKYDSV HGTFKGDVKV 
ENGHLVVDGK KVRITAEKDP NNLKWNEVHA DVVAECTGIF TTLEKAQAHI NAGAKKVVIS 
APSADAPMFV MGVNHKSVKP TDTIVSNASC TTNCLSPVAK VLNDNFGIEE ALMTTVHATT 
ATQLTVDGPS KKDWRGGRSA LCNIIPSTTG AAKAVGKVIP ELNGKLTGMA FRVPTADVSV 
VDVTVRTKKA TTLEEINAAM KKASEGELKG ILGYTEDLVV SQDFVGCKLT SIYDAKAGIG 
LSANFFKVVS WYDNETGYSN KLVDLAQHIA KL