| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1621 |
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| Symbol | |
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| ID | 8368067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1935263 |
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| End bp | 1936006 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644984061 |
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| Product | ABC transporter related |
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| Protein accession | YP_003141727 |
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| Protein GI | 256820448 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.724922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAG TAGTAAATAA CATCATCAAA ATATACAAAG GAAGAAAAGT AGTAAAAGGC
GTTTCGCTGG AAGTAAACCA AGGTGAAATC GTAGGACTCT TGGGACCTAA CGGAGCAGGA
AAAACGACTT CCTTTTATAT GATAGTGGGA CTCATCAAGC CCAACGGTGG TACTATTTTT
TTGGATAATA CCGAAATCAC CAGTTATCCG ATGTACAAAC GTGCTCAAAG CGGTATTGGG
TATTTGGCAC AAGAGGCTTC GGTATTTAGA AAGCTGAGTA TTGAGGACAA TATCAAAAGT
GTCCTACAAC TCACCAAACT TTCTAAGGCA GAACAACAAC GCAAAACCGA TGAGCTGATA
GAAGAGTTTG GCTTAGGACA TATTCGTAAA AATCGTGGAG ACTTGCTTTC AGGGGGAGAA
CGTCGTCGTA CAGAAATTGC ACGAGCTTTG GCTACTAGTC CGAAGTTTAT TTTGCTCGAC
GAGCCCTTTG CAGGGGTAGA CCCTATAGCG GTGGAAGATA TCCAACGCAT TGTAGCACAG
CTCAAAGACA AGAATATAGG TATTCTCATC ACCGACCACA ATGTACAGGA AACACTAGCC
ATTACCGACC GCACTTATTT GATGTTCGAG GGAGGAATCC TCAAATCAGG AGTGCCTGAA
GAATTGGCAG CTGATGAGAT GGTAAGAAAA GTATACCTTG GAAGAAACTT TGAATTGAGA
CGCAAGAAAA TATTAGAAGA TTAG
|
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| Protein sequence | MKLVVNNIIK IYKGRKVVKG VSLEVNQGEI VGLLGPNGAG KTTSFYMIVG LIKPNGGTIF
LDNTEITSYP MYKRAQSGIG YLAQEASVFR KLSIEDNIKS VLQLTKLSKA EQQRKTDELI
EEFGLGHIRK NRGDLLSGGE RRRTEIARAL ATSPKFILLD EPFAGVDPIA VEDIQRIVAQ
LKDKNIGILI TDHNVQETLA ITDRTYLMFE GGILKSGVPE ELAADEMVRK VYLGRNFELR
RKKILED
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