Gene Coch_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1616 
Symbol 
ID8368062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1924021 
End bp1924839 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content43% 
IMG OID644984056 
Productzinc/iron permease 
Protein accessionYP_003141722 
Protein GI256820443 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGAG ATATTATTAC TTATTTAGAG ACCATAAACC CTATACTTGC TGCCTTATAC 
GCTACCATTT TCACGTGGAG TGTAACAGCT TTGGGGGCTG CAGTGGTATT CTTTTTTAAG
AAAGAAAACA AGACCGTGTT AGATGGTATG TTAGGCTTTA CAGGAGGGGT GATGCTGGCA
GCCAGTGTGT GGAGTTTGAT AATACCCTCT ATTAATATGA CAGAAGGTGA AGGCTTTATA
AAGGTTCTAC CTGCTACGGT AGGGATATTT ATGGGAGCAC TTTTTCTTTA TGTATTAGAT
AAGTTATTAC CGCACTTTCA CGCCAACTTC AAACAAACAG AAGGTATTAA AACCGATTGG
CAAAAAACTA CTTTGCTTAT TTTAGCTATT ACCTTGCACA ACATTCCCGA AGGATTGGCG
GTAGGGGTAC TATTTGGAGG AGTAGCCGCT GGTATTCCCG AAGCCTCTAT TGCGGGAGCG
GTAACTCTTG CCATCGGTAT TGGGCTACAG AACTTTCCTG AAGGAATAGC CGTAGCGATG
CCACTCAGAC GTATGGGGGT GAGCAGATGT AAGAGCTTTT TTTATGGGCA GCTTTCGGCT
ATTGTAGAGC CCATAGCAGG GGTATTGGGT GCTTTTGCAG TACTCTTTTT TACTCCGATA
CTCCCTTATG CTCTTGCTTT TGCGGCAGGA GCTATGATTT ATGTGGTCAT AGAAGAGGTA
ATACCTGAAG CCCAGCAAAA TGAGAACACC GATGTTTCTA CCATAGGCTT TTTAATAGGT
TTTGTAGTGA TGATGGCAAT GGACGTGGTA TTGGGCTAA
 
Protein sequence
MIRDIITYLE TINPILAALY ATIFTWSVTA LGAAVVFFFK KENKTVLDGM LGFTGGVMLA 
ASVWSLIIPS INMTEGEGFI KVLPATVGIF MGALFLYVLD KLLPHFHANF KQTEGIKTDW
QKTTLLILAI TLHNIPEGLA VGVLFGGVAA GIPEASIAGA VTLAIGIGLQ NFPEGIAVAM
PLRRMGVSRC KSFFYGQLSA IVEPIAGVLG AFAVLFFTPI LPYALAFAAG AMIYVVIEEV
IPEAQQNENT DVSTIGFLIG FVVMMAMDVV LG