Gene Coch_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1613 
Symbol 
ID8368059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1921879 
End bp1922721 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content39% 
IMG OID644984053 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_003141719 
Protein GI256820440 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAC TCTTCAAAAG AACTATTACA GGCTTTATTT ATGTTTTTCT ATTGCTATCG 
GCGATTATGC TCAACGCTGA TGCTTTTGAC TTCTTGTTTT TATCCTTTGG TATTATTTGT
TTATTTGAGT TTAAAAGGCT TATCAGATTA AAGGAATTGC ATATATTTTT GCTTTTTTTG
TTGGTTTGGT GGCTGTTTAT TCACTTAAAA ACTTATCCTT TCTCGGTTTA TATCCTGCTT
TTGGCTACTT TGCTTGCCAA TATATACCTC ACGATGATGC TTTTCAACGA AAAAACGCCT
ATCCGCAAGC AAAGTAACAA TACTAAACTG CTTATTAGCC TACTGTATAT AGGAGGAGGT
TGTATATTTA TGCCTCTGAT TTACAAATAT GAGAATAATC CGAACCCTAA TTATTTTTAT
CAGAATATAT TCAACAACGA GTCGCAAATT ACGATGATAG GACTGTTGTG TATTATATGG
GCGAGTGATA GTTTTGCATA CCTTACAGGC AAAGCCTTTG GCAAACACAA GCTCTTTGAG
CGCATTTCGC CTAAGAAAAC TATTGAGGGT TTTGTGGGCG GACTCATAGG GGCGATGCTT
ATCGCTACGG CTATTTCGTA TTACAGTGGC AGACCACTAT GGCAATGGCT TATATTGGCA
GTGATTTTGG TGGTTACCGG TGCGGTAGGC GACCTGGTAG AGTCTAGCTT TAAACGAATT
GCTAAGGTAA AGGACAGCGG GACGATACTG CCAGGACACG GAGGTTTACT CGACCGCCTG
GATAGCCTTA TTTTTGCCTC GCCTTTTGCG TACTTAACGC TACTAATTTT TGACCTTTTT
TGA
 
Protein sequence
MNELFKRTIT GFIYVFLLLS AIMLNADAFD FLFLSFGIIC LFEFKRLIRL KELHIFLLFL 
LVWWLFIHLK TYPFSVYILL LATLLANIYL TMMLFNEKTP IRKQSNNTKL LISLLYIGGG
CIFMPLIYKY ENNPNPNYFY QNIFNNESQI TMIGLLCIIW ASDSFAYLTG KAFGKHKLFE
RISPKKTIEG FVGGLIGAML IATAISYYSG RPLWQWLILA VILVVTGAVG DLVESSFKRI
AKVKDSGTIL PGHGGLLDRL DSLIFASPFA YLTLLIFDLF