Gene Coch_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1611 
Symbol 
ID8368057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1919966 
End bp1920736 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content40% 
IMG OID644984051 
Producthypothetical protein 
Protein accessionYP_003141717 
Protein GI256820438 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.575841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA ATATTAGTAT CATAGGAGGA GGCAATGTGG CTTATCACCT CACCAAAGCC 
CTCTATCAGC TCCCTAAGGT GCACCTTCGG CAGTTGTATA ACCGTAGTGA ATTTAGCCCT
GAGTTTAATG ATTTTCAGGT AGATAAAATT CACAGCCTTA CCGATTTGCG CCCCACCGAT
ATATGTATTA TAGCCGTGAA AGACGAAGCT ATTAGTGAAG TTTCAGCCTT CCTTCCTTTC
GAGGGACAAT TGGTAGTGCA CACCTCTGGC AATACCCCTA TGGAGGTACT CTCACCCAAA
AACCGACGTG GCGTGTTTTA CCCTTTACAA TCCTTTTCAA AAAGCACTCA GGTCGATTTT
TCAAACATTC CTTTTTGTTT AGAGGCTGAA CATACTGAGG ATATGGAAAG ATTTCTATAC
CCATTAGCTC AAAAGCTTTC CACAAAAGTG TATCTGCTCA GTAGTTACCA ACGCAGTATA
ATGCACCTAT CGGCTGTTTT CGTTAATAAT TTCACCAATC ATTTGGTGGC TATCAGTCAA
AGAATATGCG AGGCACACGC CATTCCTTTT GAAATATTAG AACCTTTGCT AAAAAATACT
TTCGAAAAAC TCCAAACAAT GCCCGCCCTC GAAGCACAAA CAGGACCTGC ACGACGCGGC
GACACTCAAA CTATTGCTAA CCATTTGACT TTGCTTGCAG GTTATGAACG AGAAATATAC
AATATAATTA CAAAATCAAT AATAAACACC TATGGAAAGA AAGAACTATA A
 
Protein sequence
MAINISIIGG GNVAYHLTKA LYQLPKVHLR QLYNRSEFSP EFNDFQVDKI HSLTDLRPTD 
ICIIAVKDEA ISEVSAFLPF EGQLVVHTSG NTPMEVLSPK NRRGVFYPLQ SFSKSTQVDF
SNIPFCLEAE HTEDMERFLY PLAQKLSTKV YLLSSYQRSI MHLSAVFVNN FTNHLVAISQ
RICEAHAIPF EILEPLLKNT FEKLQTMPAL EAQTGPARRG DTQTIANHLT LLAGYEREIY
NIITKSIINT YGKKEL