Gene Coch_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1609 
Symbol 
ID8368055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp1918750 
End bp1919379 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content41% 
IMG OID644984049 
Productprotein of unknown function DUF417 
Protein accessionYP_003141715 
Protein GI256820436 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.22956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAT TATTATCATT TTTAGCCGAT AGCGAACGTT GCTTTGTAAA CTTTATCAGA 
GTCGCTATCT TTATTGTAAT GGCTTGGATT GGTGGACTTA AAGTGTGCCA GTACGAAGCC 
GATGGTATTG TTCCCTTTGT AACGAATAGC CCGTTTATGA GTTTCTTCTA CAACAATTCA 
GGCAAAACTG CCATTGATGA GAACGGCGTG ACAGGTGAAG CCAACAAAGG TAAAGAAGTA 
GCCCAATACA AGCTACACAA GAATCCTGAA GGGAAGATGG TAAAAGCTAA TATTGAATGG 
CATAAAGAGA ACGGTACTTA TGTGTTCTCA TATGGCTTAG GGGCTTTTAT TTGTTTGATA 
GGGTTGCTTA CCTTATTGGG TATTTGGTCG CCTAAAATAG GGGTAATAGG AGGATTACTC 
ACTTTTGGTA TGAGTATAGT TACCCTTTCT TTCCTCATCA CGACTCCTGA GGTGTATGTG 
CCTAACTTAG GTGGAGATAT GCCTACGCCT GCTTACGGAT TCCCTTATCT ATCGGGAGCG 
GGACGTTTAG TATTGAAAGA TATTATTATG TCGGCAGGTG GATTGATAGC AGCCTCAGAA 
GCTGCTCGCC GATTGCTAAA AAAGAATTAG
 
Protein sequence
MQKLLSFLAD SERCFVNFIR VAIFIVMAWI GGLKVCQYEA DGIVPFVTNS PFMSFFYNNS 
GKTAIDENGV TGEANKGKEV AQYKLHKNPE GKMVKANIEW HKENGTYVFS YGLGAFICLI 
GLLTLLGIWS PKIGVIGGLL TFGMSIVTLS FLITTPEVYV PNLGGDMPTP AYGFPYLSGA 
GRLVLKDIIM SAGGLIAASE AARRLLKKN