| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1600 |
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| Symbol | murE |
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| ID | 8368045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1908615 |
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| End bp | 1910075 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644984039 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_003141706 |
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| Protein GI | 256820427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.285187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTAA AAACATTACT TAAAAACATC ACTATAAAAA CTTCCCTTTA TGTGGAAGAT
AAAGATATTA CCTCCGTTTG CTTCGACTCT CGAAAGGCGG AAAAAGGAAG TATGTTTGTT
GCCATCACGG GTACGCAATC TAACGGACAC GAATACATAG ACCAAGCTAT ACGCAGTGGC
GCAACCGCTA TTGTATGTGA GCAATTACCT CAACAACCTT TGCCTGGTGT AAGTTATATA
GTAGTCCCCA ATAGTCATAG TGCTTTAGCC TTGATTGCAG CTAACTTCTA TGGCAATCCT
TCTGAAAAAC TTATCTTAGT AGGCGTAACA GGCACTAACG GAAAGACTAC CATTGCAACG
CTTCTCTACC AATTGTTTAG AAAAGCAGGA CAAAAAGCGG GGTTGCTCTC CACAGTGGCG
GTATACGTAG ACGACCAGTG CTTTGAAGCA ACTCACACTA CCCCCGACCC TCTTCAACTG
AATCATTATC TGCACTTAAT GGTAGAACAA GGGGTGAAAT ATTGCTTTAT GGAAGTGAGC
TCTCACGGCA TCGACCAGCA TCGTACTGAA GGACTACAGT TCGCAGGAGG TATCTTCACT
AACCTCACCC GCGACCACCT CGATTATCAC AAGACCTTCG CTGCCTATCG CGATGTGAAA
AAGCGCTTCT TTGATGCGTT ACCCGCTACC GCTTTTGCCT TAGTAAACAA CGATGATAAG
AATGGGGCTT TTATGCTACA AAATACCAAA GCCCAAAAGA AAACATACGC ACTCAAAACT
CACGCAGATT ATAAGGCATA TATCATTGAG AGCAGATTTG ACGGCTTGCT GTTGCGTATC
AATCAGCACG AGGTATGGAC AAAACTCATA GGTGAGTTTA ATGCTTATAA CCTTTTGGCG
GTATATGCTA CAGCTACTCT ATTGAGTATT GACGAAATTG AGGCTCTTAC TCTTATCAGC
GCCATAGAAC CTGTGGCAGG ACGTTTTCAG TATGCAGTAT CGGCTACGGG AGTGATTACC
ATAGTGGATT ATGCTCATAC CCCCGATGCC CTTGAAAACG TTCTGAAAAC CATTAACGAT
ATACGCACTC ACAACGAGAC CCTCACTACT GTAGTGGGCT GTGGAGGCAA TCGCGACAAA
GGTAAACGTC CTATAATGGC TGATATAGCT ACAACCCTCA GCGATAATGT AATCCTCACT
TCCGACAATC CTCGCAACGA AGAACCTGAG ACAATTCTTT CCGAAATGCA ACAAGGGGTA
CAGCCACAAT ACTTTCACAA AGTACAAACC ATCACCGACC GTCGTCAGGC AATACAATCC
GTTTGCAAGA ATGCCAAAAA GGGAGACATC ATTCTCATCG CCGGTAAGGG ACACGAAACT
TACCAAGAAA TTAAAGGCGT TAGACACCAT TTCGACGACT TTGAAATTGT ACGGGAATAC
TTGGAGCTCT ATAAGAAATA A
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| Protein sequence | MNLKTLLKNI TIKTSLYVED KDITSVCFDS RKAEKGSMFV AITGTQSNGH EYIDQAIRSG
ATAIVCEQLP QQPLPGVSYI VVPNSHSALA LIAANFYGNP SEKLILVGVT GTNGKTTIAT
LLYQLFRKAG QKAGLLSTVA VYVDDQCFEA THTTPDPLQL NHYLHLMVEQ GVKYCFMEVS
SHGIDQHRTE GLQFAGGIFT NLTRDHLDYH KTFAAYRDVK KRFFDALPAT AFALVNNDDK
NGAFMLQNTK AQKKTYALKT HADYKAYIIE SRFDGLLLRI NQHEVWTKLI GEFNAYNLLA
VYATATLLSI DEIEALTLIS AIEPVAGRFQ YAVSATGVIT IVDYAHTPDA LENVLKTIND
IRTHNETLTT VVGCGGNRDK GKRPIMADIA TTLSDNVILT SDNPRNEEPE TILSEMQQGV
QPQYFHKVQT ITDRRQAIQS VCKNAKKGDI ILIAGKGHET YQEIKGVRHH FDDFEIVREY
LELYKK
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