Gene Coch_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1589 
Symbol 
ID8368034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1896097 
End bp1896984 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content37% 
IMG OID644984028 
Producthypothetical protein 
Protein accessionYP_003141695 
Protein GI256820416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA GAAATATTTA TATTATACTT CTCTGTGCTT TAGCTTTAAC TTCTTGTGAA 
GAGGTCATAG ATTTAAAATT GGACTCTGCT CCTCAAAAGT TAGTGATTGA TGCATCTCTC
GATTGGAAGA AAGGAGAAAC AAAAGCCTAT CCTGTAGTGG ACATCAGTTA TACGGAAGCC
TATTTTGGCG ATACGCCTTC ACCTGCTATT GATAATGCCA TTGTGAAAAT CAAAGCACAT
ACTCAAACCC AGACGCAAGA GTACCAACTC TCGTTATGGG ACGGTACTTC TACCATTACC
ACAGATAACG TAGCCACATT AAAAGGCGGT AGCCGTTATG TATTCCCCGC AGGTATCACT
CCTGAGTTAG GCAAGGACTA TGAACTTATC ATAGAACTCA ACGGACAAAC TTATACTGCT
AAGAGCAAAA TGCTTGAAGC TCCTATAATA CCTTCTGACA AAATAGTACA AAAAGAAAAC
GGAGGCTTTT TAGGTGACCA AATAGAGTTA AAATTCTACT TTGACGGTAT TAGTGATGGT
GTAGCCAATG CTTATTTAGT AAGGCTGACA CAAAGTAGTA GCAAAAAAAT TACTTACGGG
ACTTTGGATG ACAACTATAT AGCTAACTAT AAGTTTTTCT TTATAATGAT AGGACTCAAT
AATGATAAGT TAAACAAAGG AGATATTGTA AACGTAACAC TTTATCGGAT TCACCCTCAA
TACAAAGAAT TTGTGCAAAT GCTTATAAGA TTATCAGAAG GACAAGGTCC GTTTACTATT
CCTACGCGCC CCATAGGTAA TATTGTGAAC AAAGGAAATT CTCGTGAGAA CCCTCTTGGA
GGTTTTCGGG TGGCACAGTA TACTACGCTC CAATATACAG TAAAATAA
 
Protein sequence
MKIRNIYIIL LCALALTSCE EVIDLKLDSA PQKLVIDASL DWKKGETKAY PVVDISYTEA 
YFGDTPSPAI DNAIVKIKAH TQTQTQEYQL SLWDGTSTIT TDNVATLKGG SRYVFPAGIT
PELGKDYELI IELNGQTYTA KSKMLEAPII PSDKIVQKEN GGFLGDQIEL KFYFDGISDG
VANAYLVRLT QSSSKKITYG TLDDNYIANY KFFFIMIGLN NDKLNKGDIV NVTLYRIHPQ
YKEFVQMLIR LSEGQGPFTI PTRPIGNIVN KGNSRENPLG GFRVAQYTTL QYTVK