| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1556 |
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| Symbol | |
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| ID | 8368000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1850310 |
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| End bp | 1851233 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644983995 |
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| Product | integrase family protein |
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| Protein accession | YP_003141662 |
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| Protein GI | 256820383 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.36987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTATCA ACGCCTTTAT TATTTATCTT TCGATAGAGA TGAAATATTC TGACCATACA
GTTGAGGCTT ATAAACACGA CCTTAGGAGT TTTGAGAAGT TTATTAAGAA TCTATATGAG
GAAAAAGGGG AAGATTGCTG TTTGGAACAA GCTGACCAAG AAGATATAAA GAAATGGATT
ATACACCTAT CGGATGAAAC TATTTCATTT AGGAGTATCA ATAGGAAGTT ATCGGCTTTA
AAGACTTATT ACAATTTCTT GAAGAAGACG AAACAGATAG AAATAAGTCC GTTTGAGAAA
GGTATATTTT TATTGAAAAC GGAGAAGAAG CACAAGTTGC CTTTTTCGGA AGCTGAGATT
GAAAAAGTGT TGTCCTTTTT TTCATCGAAG GACTCATTTG ATGAAGTGAG GAATAGGGCA
GTGATTGAGA CGCTTTATGC TACGGGTATA CGTCGCTCAG AGTTGTCTGG ACTGAAAGTA
AGCGATGTGG ATTTTGAGCA AAAACAAATA AAAGTGCTTG GGAAAGGTGA TAAAGAGCGG
TATATACCTA TTATTCCTGA GCTTGAAAAC ACTCTTAAAG AATATTTAGT TTTAAGAGAG
GAGGTAAAGA ATGAAAAAAG CCAGGATTAT CTATTTTTAG TAAAGAATGG TAAAAAGATA
TATTCGACGC TGGTATACAG AATTATTAAT TCGTATTTTA GTGTTGTAAC AACAAAGAAA
GATGTGAGTC CTCACGTATT GAGACACTCA TTTGCGAGTC ATTTGTTAGA TAATGGAGCA
GACCTTTATA CTGTGAAGGA ACTACTGGGG CATTCCAGCT TGGCTTCTAC CCAAGTGTAT
ACGAACACCA GCTTGGCTGA ACTCAAAAAG CAGTATAAGA AAGCACACCC TCGGGCAAAA
GGCAATAGCA ATGAGGAAGA ATAA
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| Protein sequence | MSINAFIIYL SIEMKYSDHT VEAYKHDLRS FEKFIKNLYE EKGEDCCLEQ ADQEDIKKWI
IHLSDETISF RSINRKLSAL KTYYNFLKKT KQIEISPFEK GIFLLKTEKK HKLPFSEAEI
EKVLSFFSSK DSFDEVRNRA VIETLYATGI RRSELSGLKV SDVDFEQKQI KVLGKGDKER
YIPIIPELEN TLKEYLVLRE EVKNEKSQDY LFLVKNGKKI YSTLVYRIIN SYFSVVTTKK
DVSPHVLRHS FASHLLDNGA DLYTVKELLG HSSLASTQVY TNTSLAELKK QYKKAHPRAK
GNSNEEE
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