| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1548 |
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| Symbol | |
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| ID | 8367992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1841136 |
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| End bp | 1842752 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644983987 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_003141654 |
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| Protein GI | 256820375 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.769333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCAATCATAT ATTACTTTTA GGAGCTTTTC TTTTCGTAGC TAATGTACAA
GCACAGAATT ATACTGATGC CTTGCGTTAC TCAACAGAAG AGCTTACAGG AACAGCTCGT
TTTAAAGCGA TGAGTGGAGC TTTCGGAGCC TTGGGAGGCG ACCCTTCTGC TATCAATGTC
AATCCTGCGG CGAGTTCTAT ATTTAGCAGT TCTGAAATCT CATTTTCTTT AAATAACAAC
AATCAGAAAA GAGAGATTAC TTTTTTAAAT AGAAATACTA AAATGACTAA TAATGACTTC
AATCTGAATC AGTTTGGAGT TGTGTTTCTC TTACCAGATG CTTCTGCTAC TTTTAAGAAA
GTGAGTTTTG GATTTAATTA TCAATTAGCA AAAACATTTG ATAATGATAA GTTTTCATAT
TCTGCTTACA ATAACAAAGG ATTAGATAAT TATTTTTTGT ACTATGCTAC AAAAGGTAAT
AACGGAAATC CATTTAGTTA TGGCACTTTT TCAGGAGGTC CTGATCGTAT AACAGGGACA
GAAGGTAACC AACGAGATGT GGGCGAATTT TATGCTAAAT TAGGAAAAAC AGAAGGGTAT
GCTGCACAAA TGGCTTATTT AGGAATGATG GCTCAACTTA TCACTCCTAC TGCTACTTCT
ACGACTAACA TTGCTTATAA TCCTAGTGGA GATAATAGAG AACGGTTACA AACTTATAGA
ATAGATCGTT CAGGTTATGT GAATAAATAT AACTTTAATT TTGCTTCACA GTTGGGAGAC
TTTATAGGCT TAGGATTAAA CTTGAATGTT CATAACATCA ATGAAAAAGC TCTTTATAGT
GCAAAAGATG ATAATTTTCA AGGCACTAAT CCTTTTTTGC GATATGCTAA CCATAAGCAA
TATATCAATA CCACAGGAGA TGGTTTTTCT TTGCAGTTAG GAGCTATTAT AAAAATAACA
GATGACTTGC GTTTAGGTAT GAGCTATCAA TCGCCTACGT GGTATAGAAT GAAAGAAGAG
TACAGACAAG TGTTGTATGG TACTGTAGGT GTTGCTACTA GAACTTTTGA TTCAGACGTT
GAGCTTATCA ATCGTTATGG AGATGAAATT TGGTATGAAC GTGAATATAA ATTCCGTACT
CCGAGTGCGT GGACAGGTAG TTTAGCTTAT ATTATCAAGA AAAGAGCCAT ACTAAGTGTA
GATTATACTT ATAGAGCTTA TAACAATCTA AAGTTTAGAA GTAGTAATAT GGAAGGTGAG
AATAATATTA TCCAAAATGA TTTGGGTGAT ACTTCTACCT TACGCGTAGG AGGTGAATTC
CGTATTCCTT TCAAAATGTT TAAGAATGAA CCAGCAAGTA CTAACTATAT AAGCCTTCGT
GGAGGTTATC GTTACGAGCA AAGTCCATAT CGCAAAAAGG TGGCTACAGT AGGCGACCTC
ACCGGCTATT CGTTTGGAGC AGGGGTTACT TTAGGAGGTA TCCGCTTAGA TGCGTCTTAT
GACATCGCTA AACAAACAAA CCTATACCAA ATGTACGAAA CAATACTTAC CGATAATGCT
CAAATAAAAT CAACTTATGG TAACTTCTTG TTTACCTTTA CTGCACAATT ATTTTAG
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| Protein sequence | MKKINHILLL GAFLFVANVQ AQNYTDALRY STEELTGTAR FKAMSGAFGA LGGDPSAINV
NPAASSIFSS SEISFSLNNN NQKREITFLN RNTKMTNNDF NLNQFGVVFL LPDASATFKK
VSFGFNYQLA KTFDNDKFSY SAYNNKGLDN YFLYYATKGN NGNPFSYGTF SGGPDRITGT
EGNQRDVGEF YAKLGKTEGY AAQMAYLGMM AQLITPTATS TTNIAYNPSG DNRERLQTYR
IDRSGYVNKY NFNFASQLGD FIGLGLNLNV HNINEKALYS AKDDNFQGTN PFLRYANHKQ
YINTTGDGFS LQLGAIIKIT DDLRLGMSYQ SPTWYRMKEE YRQVLYGTVG VATRTFDSDV
ELINRYGDEI WYEREYKFRT PSAWTGSLAY IIKKRAILSV DYTYRAYNNL KFRSSNMEGE
NNIIQNDLGD TSTLRVGGEF RIPFKMFKNE PASTNYISLR GGYRYEQSPY RKKVATVGDL
TGYSFGAGVT LGGIRLDASY DIAKQTNLYQ MYETILTDNA QIKSTYGNFL FTFTAQLF
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