| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1546 |
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| Symbol | |
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| ID | 8367990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1837720 |
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| End bp | 1839741 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983985 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_003141652 |
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| Protein GI | 256820373 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.632916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAA TAATAACACT GATATTCGTA GTACTTGTAG CAATAGCAAA TGCTCAAATA
CATAACCCTG TAAAATGGAA AACAGCGGTT GAAAAAATCA GCGATAACGA ATATTATTTG
GTAGCAACAG CTTCCATTGA GGCAGGCTGG AAACTCTACG CACAAAACAT TCCGCCTAAA
GGACCTATTC CTACCTCCTT TGCCTTTGAA AAAAGCGCAA ACTTCGAGCT TATGGGTAAG
ACCGAAGAAA GTAAACCTAT ACAAAAACAC GACAAGGTTT TTGATATGGA AATTGCTTAT
TTTCACAATC AAGCTGTCTT CAAACAACGC ATCAAAATAG TAAAACCTAT AACTTCTATA
AAAGCAACGG TAGAGTTTAT GAGCTGTGAC GATAGTAACT GTTTACCTCC TGATACAGTA
GATTTAGAGT TTTTCCTTTC GGGAGCTCCC GTTGCAAGCA AAGTGGCAAC TCCTCAGTTT
ACTTTTGGTA ATAATACCGA CGGAAATAAT ACAGTTCCTA CAACTACCGT AAGTCAGACT
ACAACAACAA AAGCTCCTAA TACTACCCCT ATCTCACGTC AAGGTCTGTG GACAATATTC
TTTATATCTT TTCTTTCTGG CTTTGCTGCC TTGCTCACTC CTTGTGTATT CCCAATGATT
CCTATGACGG TGAGTTATTT TACCAAACAG AGCAAAACTA AAGCCAAAGG TGTGAAGAAT
GCTGTGATCT ATGGCACTTC TATCATTGTG ATTTACGTAT TGTTAGGCTC AGCTATTACT
GCTATCTTTG GTGCAGATGC TTTGAATGCT TTAGCAAGTA ATTTCTGGTT CAACCTCATC
TTTTTCTTGA TTTTGGTAGT GTTCGCTATT TCATTCTTAG GAGCGTTCGA AATTACTTTG
CCTAGTTCGT GGAGTACCAA AGTAGATGCT CAAGCCGATC GCAGTGGTTT TATAGGCATC
TTCTTTATGG CGTTGGCGTT AGCTATCGTA TCATTCTCGT GCACAGGTCC TATTGTAGGT
ACTTTGTTAG TACAAGCTGC TTCCGAAGGG GGGATCGCTC CTATTATTGG TATGTTCGGC
TTCTCATTGG CAATAGCCTT GCCTTTTGCC TTGTTCGCAG CCTTCCCTGG TTGGTTACAC
TCCTTGCCTA AATCAGGTGG TTGGATGAAC ACCGTGAAAG TGGTATTGGG ATTTTTAGAA
TTGGCATTAG CATTCAAATT CCTTTCTAAT GCTGATTTGG TATTACAATA CCACTGGATA
GAACGAGAAG TATTTATCGC TATTTGGATT GCAGTTTTTG GTGCCTTATC GCTCTACCTT
TTTGGAAAAA TACGTTTGCC TCACGACGAT GCCACCGACC GTATTTCAGT AGGTCGCCTG
CTATTAGGCT TACTAACTCT TAGTTTTACG GTTTATATGA TTCCGGGGTT ATGGGGGGCA
CCACTCAACC TTATCAATGC TTTTCCTCCT CCGCAACATT ATAGCGAATC GCCTTACGGT
GTAGGCTATA CCGCTGACGG AGGTAGTACC AGTGTAGATG AAGGTGCTCT TCCTGAAGGA
GCGCACTTGT TCAAACCTCA CAATATCGTT ACTTTTGATG ATTATGAAAA AGGATTAGCT
TATGCCAAAC AAGTGAACAA ACCCGTATTG TTAGACTTTA CTGGCTGGTC TTGTGTAAAC
TGCCGTAAAA TGGAACAAAA TGTATGGCCT AACCCCCAAG TGCTCGATGC TCTTAGAAAT
GAGGTGGTAT TAATTTCGTT GTACGTAGAC GATAAACGTC CGCTACCCGA AAGCGAAGTG
AGACCTTCAC AGATTAGAGA AGGCAAGATG ATAAAAACCA TTGGACAAAA ATGGAGTGAG
TTTCAAACCC TCCATTACAA AGCCAATACA CAACCCTTTT ACGTGCTGAT GAATCTCCAA
GGAGAGAACT TAGTAGACCC GATAGGATAT ACCCTTGATA CCGATGACCC CGATGAGTTT
TACCAATGGA TAAAACAAGG AGTTTCTGCT TTTGGCAAAT AA
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| Protein sequence | MKKIITLIFV VLVAIANAQI HNPVKWKTAV EKISDNEYYL VATASIEAGW KLYAQNIPPK
GPIPTSFAFE KSANFELMGK TEESKPIQKH DKVFDMEIAY FHNQAVFKQR IKIVKPITSI
KATVEFMSCD DSNCLPPDTV DLEFFLSGAP VASKVATPQF TFGNNTDGNN TVPTTTVSQT
TTTKAPNTTP ISRQGLWTIF FISFLSGFAA LLTPCVFPMI PMTVSYFTKQ SKTKAKGVKN
AVIYGTSIIV IYVLLGSAIT AIFGADALNA LASNFWFNLI FFLILVVFAI SFLGAFEITL
PSSWSTKVDA QADRSGFIGI FFMALALAIV SFSCTGPIVG TLLVQAASEG GIAPIIGMFG
FSLAIALPFA LFAAFPGWLH SLPKSGGWMN TVKVVLGFLE LALAFKFLSN ADLVLQYHWI
EREVFIAIWI AVFGALSLYL FGKIRLPHDD ATDRISVGRL LLGLLTLSFT VYMIPGLWGA
PLNLINAFPP PQHYSESPYG VGYTADGGST SVDEGALPEG AHLFKPHNIV TFDDYEKGLA
YAKQVNKPVL LDFTGWSCVN CRKMEQNVWP NPQVLDALRN EVVLISLYVD DKRPLPESEV
RPSQIREGKM IKTIGQKWSE FQTLHYKANT QPFYVLMNLQ GENLVDPIGY TLDTDDPDEF
YQWIKQGVSA FGK
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