| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1545 |
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| Symbol | |
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| ID | 8367989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1836052 |
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| End bp | 1837710 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644983984 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_003141651 |
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| Protein GI | 256820372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.161326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA AACACTACAT ACTCCCCATA TTTATAGGCT TAAGTTTAGC ATTAGGGCTT
GTTTTAGGAA GACAGCTTGC GAATTTCTAC ATTCCCAAGC CTCCTCCACC CGTACCTATG
CCTATTACTG ATATAGATAC GATGCAAGAG AACCCTTATA AAGTGAAATT AAACAGACTT
ATCGACTATA TAGAAGAGGA CTATGTAGAT AAAGTAAATA CCGATAGTAT TGTAGACCTC
ACAATAAATA GTATTTTGCG CAAGTTAGAT CCTCACTCCA CTTATATCTC TAAAAGTGAT
ATCCAAGAGG TAGCCGAAAC AATGAGTGGT AAGTTCGTAG GTGTGGGTAT TAGCTTTTAT
ATTTACAAAG ATACCATTGC CGTAATCAAA CCTATTGAAG GAAGTGATGC AATGCACAAA
GGTATTCGCT TTGGCGATCG TATTTTAATA GCAGGGAAAG ATACCTTGTT TAAAAAACAC
TTAAATACTG ATAAAATCAA AAATATTCTC AAAGGAGAAA TGGGGTCAAA AGTAGATTTA
ACTATTTACC GAAAAAGTAA AGATAGTCTT TTTAAGATAG GTATTGAGCG AAAGTTTATT
CCCATTAAAA GCATTGATTG TTTTTACAAA GTAAATGATA CTTTAGGCTA TATACGTATG
AATAGGTTTG CCGAAACTAC TAATGACGAA TTTGCCTCAG CACTTAAAGC TTTGGAAAAA
GAAGGTATTA ACAGTTTAAT TCTAGATTTG CGTAATAATT CTGGTGGTTT TCTCAATGTA
GGAATTCAGA TAGCCGATGA GTTCTTAGCA AAGGATAAGA TGATTGTATT TACCAAAAAC
AATCGCAAAG AAATAGAAGA AACCTATTCT ACTGCTGGCG GGTTATTCGA AAATAAACCC
ATATTTGTAC TTGTCAATGA AAATAGCGCT TCAGCTAGTG AGATTGTAGC AGGAGCTTTA
CAGGATAACG ATAGAGGTGT AATAGTAGGA CGTAGAACTT TCGGCAAGGG ATTAGTACAA
AGCGAAATGC CTTTACCTGA TGGTTCAGCA GTACGTCTTA CTACCGCTCG CTACTACACT
CCCACTGGAC GTTCTATACA AAAGCCCTAC AACTTGCGTC ACCAGCGCAG AAGTTTCCAA
ATAGATAATG CTACAGTCCC CGATTCTTTA AAGTTTACAA CTCCTAAAGG AAAAATAGTG
TATGGTGGTG GTGGTATCTA CCCTGATGTA TATGTACCAG TAGATATGAA ACCAGAAACC
TATATGGTAA ATGAAGTGCT AAACTCAGGA CTTACGAACT TCTTTTTGTT TGAATACTTA
GACAGTCACC CTTCTCAGAA CCATAAGCCT CAAAAGTCTT ATTTCATAGG GGGATACAAA
GTGCCCAAAG AAATGCTCAA CGCCTTTTCA AAGTTTTTAA AAGAGCGTAA AATCAACATA
GATTTCAAAC GAAACAGCAA TGATATATCA AAATATCTAA AAGCTAACTT AGCTGAGATA
TGGTTTAACG ATAATGTAGC AGGGCTTATC AGGAATCAAG GAGATTTTTA CATAGAAAGC
TGTCTACACT ACTACAAACA AAAACACCCT AAAAATGGTA CTGAAAATCC TACCAAAGTG
GTAAGGAGAA AAGCCAAAAA ACCTATAAAA AGAGTTTAA
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| Protein sequence | MKNKHYILPI FIGLSLALGL VLGRQLANFY IPKPPPPVPM PITDIDTMQE NPYKVKLNRL
IDYIEEDYVD KVNTDSIVDL TINSILRKLD PHSTYISKSD IQEVAETMSG KFVGVGISFY
IYKDTIAVIK PIEGSDAMHK GIRFGDRILI AGKDTLFKKH LNTDKIKNIL KGEMGSKVDL
TIYRKSKDSL FKIGIERKFI PIKSIDCFYK VNDTLGYIRM NRFAETTNDE FASALKALEK
EGINSLILDL RNNSGGFLNV GIQIADEFLA KDKMIVFTKN NRKEIEETYS TAGGLFENKP
IFVLVNENSA SASEIVAGAL QDNDRGVIVG RRTFGKGLVQ SEMPLPDGSA VRLTTARYYT
PTGRSIQKPY NLRHQRRSFQ IDNATVPDSL KFTTPKGKIV YGGGGIYPDV YVPVDMKPET
YMVNEVLNSG LTNFFLFEYL DSHPSQNHKP QKSYFIGGYK VPKEMLNAFS KFLKERKINI
DFKRNSNDIS KYLKANLAEI WFNDNVAGLI RNQGDFYIES CLHYYKQKHP KNGTENPTKV
VRRKAKKPIK RV
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