Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1544 |
Symbol | |
ID | 8367988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1834566 |
End bp | 1836044 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983983 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_003141650 |
Protein GI | 256820371 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.138396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA ATTTAACATC ACGCAGTGAA GACTATTCTA AATGGTATAA CGAATTGGTT GTAAAAGCCG ATTTAGCCGA AAGTTCAGGC GTGCGTGGCT GTATGGTAAT CAAACCTTAC GGCTATGCTA TTTGGGAAAA AATGCAAGCA GAACTCGACC GTATGTTTAA AGAAACTGGT CACACCAATG CTTATTTTCC TTTATTTGTA CCCAAAAGTT ATTTTGAAGC AGAGGAAAAG AATGCTGAAG GTTTTGCTAA AGAATGTGCC GTAGTAACCC ACTATCGTCT TAAAGCCGAC CCTAATGAAA AAGGAAAACT AATGGTAGAC CCGGAAGCAA AACTCGAAGA AGAGCTGATA GTACGTCCTA CCTCAGAGGC AATTATTTGG AACACCTACA AAAACTGGAT ACAGTCTTAC CGTGATTTGC CTATACTCAT CAACCAATGG GCGAATGTTG TGCGCTGGGA GATGCGCACC CGTCTATTTC TTCGCACTGC GGAATTCTTG TGGCAAGAAG GACACACCGC TCACGCCACT AAAGCCGAAG CCATAGAAGA AGCTCAAAAG ATGATGAACG TATATGCTGA CTTTGTAGAG AACTTTATGG CTGTGCCTGT AATAAAAGGT GTAAAAAGTG AAAGCGAACG CTTTGCAGGG GCTGACGATA CCTACTGTAT AGAAGCCCTT ATGCAAGATG GAAAAGCACT GCAAGCAGGA ACATCACACT TCTTAGGACA GAACTTCGCC AAAGCCTTTG ACGTGAAATA TGTGAGCAAA GAAGGTAAAC AAGAATATGT ATGGGCGAGC TCTTGGGGTG TTTCTACTCG CTTGATGGGA GCACTCATTA TGACCCACAG CGATGACAAT GGATTAGTAC TTCCTCCTAA ATTGGCTCCT ATACAAGTGG TAATCGTGCC TATCTACAAA GGAGCTGAAC AATTAGAAAA AGTGCGCTCC CATATTCAGC CTTTAATTGA AGAACTCAAA AAACACAATA TTAGTGTAAA ATTCGACGAT CGTGATACAC AGTCTCCTGG CTTTAAGTTC CACGAGTACG AACTCAAAGG GATACCTGTA CGCTTAGCTG TAGGACAACG CGACATAGAG CACAATACCT TCGAAGTAGC CCGTCGCGAT ACTCTTACCA AAGAGACAGT AGCTGGTGAC CAAATTGTAG CTCATATTCA GCAGCTTTTA GAGAATATTC AATCCAATAT GTACAACAAA GCTTTGGAGT ACCGCAATAC CCATATTACC GAGGTAAATA GCTATGACGA GTTCAAGGAA TTGTTAGAAA CTAAAGGAGG TTTCCTCTCA GCACACTGGG ATGGTACTCC CGAAACTGAA GAGCGTATCA AAGAAGAGAC CAAAGCAACG ATACGTTGTA TACCATTGGA TATCAAGGAA GAGTCTGGGT ATTGCATCTA CTCGGGTAAG CCTTCGAAAA AACGAGTGCT TTTTGCTAAA GCTTATTAA
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Protein sequence | MSKNLTSRSE DYSKWYNELV VKADLAESSG VRGCMVIKPY GYAIWEKMQA ELDRMFKETG HTNAYFPLFV PKSYFEAEEK NAEGFAKECA VVTHYRLKAD PNEKGKLMVD PEAKLEEELI VRPTSEAIIW NTYKNWIQSY RDLPILINQW ANVVRWEMRT RLFLRTAEFL WQEGHTAHAT KAEAIEEAQK MMNVYADFVE NFMAVPVIKG VKSESERFAG ADDTYCIEAL MQDGKALQAG TSHFLGQNFA KAFDVKYVSK EGKQEYVWAS SWGVSTRLMG ALIMTHSDDN GLVLPPKLAP IQVVIVPIYK GAEQLEKVRS HIQPLIEELK KHNISVKFDD RDTQSPGFKF HEYELKGIPV RLAVGQRDIE HNTFEVARRD TLTKETVAGD QIVAHIQQLL ENIQSNMYNK ALEYRNTHIT EVNSYDEFKE LLETKGGFLS AHWDGTPETE ERIKEETKAT IRCIPLDIKE ESGYCIYSGK PSKKRVLFAK AY
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