Gene Coch_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1536 
Symbol 
ID8367980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1823434 
End bp1825188 
Gene Length1755 bp 
Protein Length584 aa 
Translation table11 
GC content38% 
IMG OID644983975 
Productaerotolerance-related protein BatD 
Protein accessionYP_003141642 
Protein GI256820363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0248061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATACA AGATAATATT CTTTATAACT TTCTTAATCC AAAGTCTCTA TGCACAACAA 
GTAGAGTTCA AAGCCGAAGT GAGTAAAAAT CAATTAGGGG CTAACGAACG CTTGCGCATA
GAGTTCTCTA TGAATAAAGA CGGCGATAAC TTTACTCCGC CTAACTTTCA CGGTTTTACC
ATAGTAATGG GACCTTCGCA ATCGGTTTCA AGATCGTGGA TTAATGGAGT AAGTAGTTTC
TCCAAAACTT ATATTTACAT TCTCCAACCT ACTGCCAAAG GTAAGTTTAC CATAGGACAA
GCAAGTATAG AAATTGACGG TAGAACATAT AAAACAAACC CCATAGCTAT CACTGTTACC
GAGGCAGTAA AAACTCCCTC AATAGACAGA AATACTAACG ATATCGCACG TGAAAACCTA
TTCCTTCTTG CCGAAGTTTC AAAACCCAAC CCATACCTTA ACGAAGCTGT AAGTGTGGTA
TATCGGCTTT ATGTAGGAGG AGAAATATCT CTTAGTAACC TGCGTTTGTT AGATGTACCA
AAATACCCTA ACTTCTGGAG TCAAGATATA CGTCTTCAAA ATTATGAGGT AGAAAATTGC
TCTTATCAAG GTCGTTCCTA CCGTTGTATT GTAGTAAAAA GAATAGTGCT TTACCCTCAA
AAAACAGGCG CTATCACTCT CGAACCTCTG TCTGTAGAAG CTATTATCAA TGCTCCTACA
GGACAACGAG ACTTCTTTGG GCGTCCTTTC TATGAAGAAA TATCACGCAA AGTAAGCTCT
GGTAGTCGTG TTTTAAACAT AAAGCCCTTA CCTGAGGAAG GAAAACCCGA AAACTTCTCA
GGAGCAGTCG GTAACTTCTC TTTTTCTGTA AATGCTACAA AACAAACACT CAAAGCTAAT
GAAAGTACTC AACTAAAAAT AGAAGTATCA GGTAATGGCA ATTTTAAACT GTTTGATTTA
CCTAAGCCTA CTTTCCCATC ATCGTTAGAA GTATATGCTC CCGAACAAAA AGAAGATATC
AACACTTCTC TTAACGGAAT GAAAGGACGC TTAGAACAAA CCTATACTAT CGTTCCTGAA
TACAAAGGAA AATATCCTAT TTCAGGACTC TCTTTCTCGT ATTTCAACCC TAATACTCAG
AAATATGAAA CTGTAAAAAC CGAAGATATT TGGATAGATG TAACCGAAGG TCCTACAGCC
GAAAACCAGC CTAATGACAC GGCTAATAGT AATAACATTC CTCTAAAACC AGAAGGTCTT
CAAACCAATG CTGACCTTCA GCCAATGCAC CAACCCGTAT TCTTTGGTTC TACAGCTTAC
TATTTATGGC TGTTCTTGCC TTTGCTTCTT ATCCCTATTG TACTTATCTG GTGGCATATC
AAAATGCAAA GAGCCGGAGA TATCGAAGGT AATAAAGTAA GAGTAGCCAA TAGATTAGCG
AAGAAATATC TGGGAGAAGC TAAACGTAAA TTAGGTGATA AAGGTACCTT CTACGAAGCG
TTAGAACGCG CCTTGCACAA TTACTTAAAA GCCAAATTAA AAATTGAAAC AGCTGAAATG
AGCAAAGATA AAATCACTGA ACTATTGCTC AGCCGAAAAG CTACTGAAGC TACCGTAGCT
CAGTTTATGG CATTACTCGC TAATTGCGAA ATGGCACGCT ACTCTCAGCA TCACACCGAT
GCTTCTATGG AAAAAGATTT TAGCGAGGCA GTACAAGTAA TCTCTGCCCT CGACAAACAA
GTGAAAAACA AGTAA
 
Protein sequence
MKYKIIFFIT FLIQSLYAQQ VEFKAEVSKN QLGANERLRI EFSMNKDGDN FTPPNFHGFT 
IVMGPSQSVS RSWINGVSSF SKTYIYILQP TAKGKFTIGQ ASIEIDGRTY KTNPIAITVT
EAVKTPSIDR NTNDIARENL FLLAEVSKPN PYLNEAVSVV YRLYVGGEIS LSNLRLLDVP
KYPNFWSQDI RLQNYEVENC SYQGRSYRCI VVKRIVLYPQ KTGAITLEPL SVEAIINAPT
GQRDFFGRPF YEEISRKVSS GSRVLNIKPL PEEGKPENFS GAVGNFSFSV NATKQTLKAN
ESTQLKIEVS GNGNFKLFDL PKPTFPSSLE VYAPEQKEDI NTSLNGMKGR LEQTYTIVPE
YKGKYPISGL SFSYFNPNTQ KYETVKTEDI WIDVTEGPTA ENQPNDTANS NNIPLKPEGL
QTNADLQPMH QPVFFGSTAY YLWLFLPLLL IPIVLIWWHI KMQRAGDIEG NKVRVANRLA
KKYLGEAKRK LGDKGTFYEA LERALHNYLK AKLKIETAEM SKDKITELLL SRKATEATVA
QFMALLANCE MARYSQHHTD ASMEKDFSEA VQVISALDKQ VKNK