Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1536 |
Symbol | |
ID | 8367980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1823434 |
End bp | 1825188 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644983975 |
Product | aerotolerance-related protein BatD |
Protein accession | YP_003141642 |
Protein GI | 256820363 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0248061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA AGATAATATT CTTTATAACT TTCTTAATCC AAAGTCTCTA TGCACAACAA GTAGAGTTCA AAGCCGAAGT GAGTAAAAAT CAATTAGGGG CTAACGAACG CTTGCGCATA GAGTTCTCTA TGAATAAAGA CGGCGATAAC TTTACTCCGC CTAACTTTCA CGGTTTTACC ATAGTAATGG GACCTTCGCA ATCGGTTTCA AGATCGTGGA TTAATGGAGT AAGTAGTTTC TCCAAAACTT ATATTTACAT TCTCCAACCT ACTGCCAAAG GTAAGTTTAC CATAGGACAA GCAAGTATAG AAATTGACGG TAGAACATAT AAAACAAACC CCATAGCTAT CACTGTTACC GAGGCAGTAA AAACTCCCTC AATAGACAGA AATACTAACG ATATCGCACG TGAAAACCTA TTCCTTCTTG CCGAAGTTTC AAAACCCAAC CCATACCTTA ACGAAGCTGT AAGTGTGGTA TATCGGCTTT ATGTAGGAGG AGAAATATCT CTTAGTAACC TGCGTTTGTT AGATGTACCA AAATACCCTA ACTTCTGGAG TCAAGATATA CGTCTTCAAA ATTATGAGGT AGAAAATTGC TCTTATCAAG GTCGTTCCTA CCGTTGTATT GTAGTAAAAA GAATAGTGCT TTACCCTCAA AAAACAGGCG CTATCACTCT CGAACCTCTG TCTGTAGAAG CTATTATCAA TGCTCCTACA GGACAACGAG ACTTCTTTGG GCGTCCTTTC TATGAAGAAA TATCACGCAA AGTAAGCTCT GGTAGTCGTG TTTTAAACAT AAAGCCCTTA CCTGAGGAAG GAAAACCCGA AAACTTCTCA GGAGCAGTCG GTAACTTCTC TTTTTCTGTA AATGCTACAA AACAAACACT CAAAGCTAAT GAAAGTACTC AACTAAAAAT AGAAGTATCA GGTAATGGCA ATTTTAAACT GTTTGATTTA CCTAAGCCTA CTTTCCCATC ATCGTTAGAA GTATATGCTC CCGAACAAAA AGAAGATATC AACACTTCTC TTAACGGAAT GAAAGGACGC TTAGAACAAA CCTATACTAT CGTTCCTGAA TACAAAGGAA AATATCCTAT TTCAGGACTC TCTTTCTCGT ATTTCAACCC TAATACTCAG AAATATGAAA CTGTAAAAAC CGAAGATATT TGGATAGATG TAACCGAAGG TCCTACAGCC GAAAACCAGC CTAATGACAC GGCTAATAGT AATAACATTC CTCTAAAACC AGAAGGTCTT CAAACCAATG CTGACCTTCA GCCAATGCAC CAACCCGTAT TCTTTGGTTC TACAGCTTAC TATTTATGGC TGTTCTTGCC TTTGCTTCTT ATCCCTATTG TACTTATCTG GTGGCATATC AAAATGCAAA GAGCCGGAGA TATCGAAGGT AATAAAGTAA GAGTAGCCAA TAGATTAGCG AAGAAATATC TGGGAGAAGC TAAACGTAAA TTAGGTGATA AAGGTACCTT CTACGAAGCG TTAGAACGCG CCTTGCACAA TTACTTAAAA GCCAAATTAA AAATTGAAAC AGCTGAAATG AGCAAAGATA AAATCACTGA ACTATTGCTC AGCCGAAAAG CTACTGAAGC TACCGTAGCT CAGTTTATGG CATTACTCGC TAATTGCGAA ATGGCACGCT ACTCTCAGCA TCACACCGAT GCTTCTATGG AAAAAGATTT TAGCGAGGCA GTACAAGTAA TCTCTGCCCT CGACAAACAA GTGAAAAACA AGTAA
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Protein sequence | MKYKIIFFIT FLIQSLYAQQ VEFKAEVSKN QLGANERLRI EFSMNKDGDN FTPPNFHGFT IVMGPSQSVS RSWINGVSSF SKTYIYILQP TAKGKFTIGQ ASIEIDGRTY KTNPIAITVT EAVKTPSIDR NTNDIARENL FLLAEVSKPN PYLNEAVSVV YRLYVGGEIS LSNLRLLDVP KYPNFWSQDI RLQNYEVENC SYQGRSYRCI VVKRIVLYPQ KTGAITLEPL SVEAIINAPT GQRDFFGRPF YEEISRKVSS GSRVLNIKPL PEEGKPENFS GAVGNFSFSV NATKQTLKAN ESTQLKIEVS GNGNFKLFDL PKPTFPSSLE VYAPEQKEDI NTSLNGMKGR LEQTYTIVPE YKGKYPISGL SFSYFNPNTQ KYETVKTEDI WIDVTEGPTA ENQPNDTANS NNIPLKPEGL QTNADLQPMH QPVFFGSTAY YLWLFLPLLL IPIVLIWWHI KMQRAGDIEG NKVRVANRLA KKYLGEAKRK LGDKGTFYEA LERALHNYLK AKLKIETAEM SKDKITELLL SRKATEATVA QFMALLANCE MARYSQHHTD ASMEKDFSEA VQVISALDKQ VKNK
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