Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1525 |
Symbol | |
ID | 8367965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1812920 |
End bp | 1814224 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644983960 |
Product | hypothetical protein |
Protein accession | YP_003141631 |
Protein GI | 256820352 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.6026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAATAT TAAGTTGCCT TGGTCTTGTG TCTGTGCAAT GTACCAAAAC CGACACAGAA CGTGTAGAAA TAAAAGGAGA ACGCGGTGAG CGTGGCAACT TAATCCTCTC AGGAATAGGC GTGCCTGATG CTTCTCAAGG AACGGTAGGC GATTATTATC TCGACCTATC TACAGCCAAT CTTTATGGAG CTAAAACAGC ACAAGGATGG GGAACTCCTA TTTCTTTAAA AGGCTTAAAA GGTGATGCAG GAGCCGATGG TGCTAATGGT ACCGACGGTC AAAACGGAAA AGATGCTCCT GTACCTCAAA TAAAAAATGG CTTTTGGTAT ATAGGTGAAA CGAATACTCA TATTAAAGCC CAAGGAGAAA AAGGTACTGA TGGTACTAAT GGCACCAATG GTCAAAAAGG TCAAAATGGT ATTACGCCTC ATATAGGAGA GAATGGTAAT TGGTTTATAG GGAATCAGGA CACTCATATA AAAGCTCAAG GAGACAAAGG AGAAACAGGT GCTACGGGTG CTACGGGAGC ACAAGGGCTT CCCGGTAAAG ATCGCTCTAA AATATATTCA GGACAAGGCA AACCCGTGAG TCAAGGAGTA GAAGGCGATT ACTATATCGA TACTGAAGCT AAAATATTCT ATGGACCTAA AACTAATATA GGTTGGCCTT CTACCGGTAT TTCTCTTACC GCTCAACAAA TGAGTGACAC AGACTATGAA CTTAGCGCTG ACGGAAAGAC CTTAGTAAAA TGGAAAAATG AGAAAACACT TTTTATAGAT ATGAATACTG ACCCTAAGTT AAAAGATGTA GAAATCATAG CTGACAATGC TTTTAACGCA GAAATAAATA AACTCACATA CCAGTTGAGA ACTTTCGTCA TTGGGGATAA AGTAAAAGAT ATAGGGGCTA AGGCTTTCTA TCTATGTACT AAATTGACAA GTGTAGAAGT ATCGAATGAG AATATAAGAA GAGAGATTAC AAAAATAAAA ACACAAACCT TTGCTAATTG TACTCACCTA CAAAATGTAG ATATTCCTTC GAGCGTTACT ACTATTGAAG CAAGAGCTTT CACAGGTTGT AATAGACTTA CAAGTGTTAT ACTTCCTGAA ACAGTAAACA ATATAGTAAA TAATGCCTTT GCAAAGTGTG ATAATTTGCA TACTGTAATC ATACGTAATC CTAATGCTTT TATAATAGGA ACTATGGCAT TTAATCAAAC ACTATTGCGC AACATCTATG TCCCTTCCGG GAAAGTAGAG GAATATAAAA TATTAAACCC TCAATACAAA GATTTTATCA AATAA
|
Protein sequence | MAILSCLGLV SVQCTKTDTE RVEIKGERGE RGNLILSGIG VPDASQGTVG DYYLDLSTAN LYGAKTAQGW GTPISLKGLK GDAGADGANG TDGQNGKDAP VPQIKNGFWY IGETNTHIKA QGEKGTDGTN GTNGQKGQNG ITPHIGENGN WFIGNQDTHI KAQGDKGETG ATGATGAQGL PGKDRSKIYS GQGKPVSQGV EGDYYIDTEA KIFYGPKTNI GWPSTGISLT AQQMSDTDYE LSADGKTLVK WKNEKTLFID MNTDPKLKDV EIIADNAFNA EINKLTYQLR TFVIGDKVKD IGAKAFYLCT KLTSVEVSNE NIRREITKIK TQTFANCTHL QNVDIPSSVT TIEARAFTGC NRLTSVILPE TVNNIVNNAF AKCDNLHTVI IRNPNAFIIG TMAFNQTLLR NIYVPSGKVE EYKILNPQYK DFIK
|
| |