| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1520 |
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| Symbol | |
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| ID | 8367960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1806050 |
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| End bp | 1808521 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983955 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_003141626 |
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| Protein GI | 256820347 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.115215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCAG AAAAAGATTT AGAAGCCTTA ATGGCTCAGG TAGATGGTGC TGTGGACAGG
CAGTACGACT TCATTAAAGA GATGAAGCAG ATAAAGCAAA CGCTTTGGGA ACTGAAAGCC
CAAATGCGTG CTACTTCGGT ATTAAGTTCG GCGGTACCCG CAGAAACGGC AGTGCCTGAG
GGTACACGTG AGGCAGTAAC AGAGACTCCC CCTGTGGAAA CGGTAACTCC TGTTGAGGAA
CAAACCGTAA TAAATACTGT GGCTGAGGAA ATGACGACAG CTGTTGTAGA GAAGCAAACG
GCTGTTGCGG CGGTTGCTGA ACCGGTGCAA GAAACTTCAC AACCGAAACA AGAGACCCCT
CCGATTACTT TTACAACAAA AACGAATCCG TTTGCGCCCA AAAAGAAGGT GAGAAATCCG
TTTGAGCCGA AGCAACCTAC TAACTGGGAG CGATTTATCG GTGAGAATTT GTTTAGCAAG
ATAGGGATAG TGATTATTAT TATTGGGGTG TTTATAGGGG TGAAATACTC TATTCAGCAT
AACCTTATCA GCCCTGCAAT GCGCTTGGTT TTAGGTTACT TAATGGGTAT AGGGCTTTTT
GTAACGGGAG CTATGCTCAA GAAAAAATAT GAGAGTTTTA GTGCTATCTT GGTGAGTGGA
GCAATGACGA TTTTTTATTT CGTCACCTTT ATTGCATATG CTGTTTTTGG TTATTTCCCG
CAATCTCTTG CCTTTGTGCT GATGTTCCTC TTTACAGCCT TTACGGTACT TGCTTCGTTG
AGCTATAACC AAGTGGTGAT AGCTATTATA GGGCTTGTGG GAGGTTATGC GGTACCTTTT
CTTTTGAGTA ATAACTCGGG TCAGGTAGAA ATCTTATTTG CGTATACAGC AATTATTAAT
ATAGGTGTGC TGATACTTTC GTTTTATAAG CAATGGCGTT CACTGTACAT TTCGGCGTTG
TTCCTCACTT GGCTATTGTT GTTCTCGACG TGGGTATCGG CTTATCAGTA CGACGACTTT
GTGCCTTACT TTGTATTTAA TTTGGTAACG TTCCTCACTT TCTATGTTGC TTTTATAGCT
CAGAAAATAC ACAGGGTACA GGAATTGGAA GCGGTAGATG TGCTTTTGTT CTTGTTTAGT
AGCTTGTCGT TTTACGCGAT GGGTGTTTGG CTTATATTGG ATTATTATCC TAATAATCGG
ACTTTTGTGG CGATGTTTAC ATTGCTTAAC GCTGTATTTC ACTTTTTGGT GGGTTATTAT
TTTCACCTCA AAAAGGCGCC TTCTCAGGCT TTGAAATACT TAGTTTTGGT GTTGGCACTC
TCATTTGCTA CTTTGGTAAT TCCGATACAG TTTAAAGGAA CGTGGATAAC TATCTTCTGG
ATAGCCGAAG CTGCGTTACT TTTTGGGTTT GGGCGTACTA AAAAAATGCC TGTGTACGAG
CGAATTTCAT ACGCAGTAGC GATTTTGGCT ACTTTCAGTT TGCTGATAGA TTGGGGGAAA
GGCTCTTATA GTATCTTTGA TATGGAAGAC GCGAGAGCGT ATATCACGCC TTTTGCTAAC
TTGCTCTTTA TTACAGGGTT ACTTTATAGT GTGGCGGTAG GAGCAATGGC TTATATCAAT
GATAAATACA AAGAGACAGG GACACTTAAT AAAGTGTTGA GCTTTTTGTT CAATATTTTT
TCGGTACTTA TTTTGTATTG CACTTTTTAC AGAGAGATAA GCGTGTTTTG CGATATGAGG
GCTTTACATC AAGACCCTGT GATTTACAGC CATTATGAGG CATATCAAGA CTTGAACACT
TTTAAAGGGG TATGGCATAT TATATACAGT GTGTTGTTTA TTTCGGCTTA TAGTTTTCTG
AATGTGAAGT ACCTGAAAAA GAAATTGTTG GCAGAACTAC AAATAGGCTT AAACTTTTTG
TTACTGACTA TATTTATGAC CTTGGGGCTT TACTATTTCA GTGAGTTGCG AGAACGTTAT
ATGGAAGAAG TGCAGGAAGG AGGGCAGTTA TCACTTTGGT TTTTAAATAT TAGATATGTG
GGTTTGCTCT CGCTGGTGGT ATTAGGCAAT AGCATTTATG CCCTCAGTAA GTTTTTGGAA
TTTAAAACAG GGGCAAGGCG TGTATTGGAA ATGTTGTTGC ATCTGGTTAT TTTGTGGGTT
GCTAGCAGTG AATTACTGCA CTGGACAGAT ATATATGAAT CGGTAGCTAA TTATAAATTA
GGTCTTACAA TTTTATGGGG AGGTTATGCT ATTTTATTGG TAGTATTGGG TATTTTTAAA
AGGAAGAAAT ACCAGCGAAT ATCGGGTATT ATATTGGTAG GTTTTACGCT CTTGAAGTTA
TTCTTTTACG ATACTACCCA CCTCGATACG CTACATAAGA CCATAGTGTT TGTACTGCTT
GGGGTATTGC TACTGGTAGC ATCGTTTCTC TATAACAAAT ATACCAAAGA AATAGAGGGA
GAGCAAAAAT AA
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| Protein sequence | MVSEKDLEAL MAQVDGAVDR QYDFIKEMKQ IKQTLWELKA QMRATSVLSS AVPAETAVPE
GTREAVTETP PVETVTPVEE QTVINTVAEE MTTAVVEKQT AVAAVAEPVQ ETSQPKQETP
PITFTTKTNP FAPKKKVRNP FEPKQPTNWE RFIGENLFSK IGIVIIIIGV FIGVKYSIQH
NLISPAMRLV LGYLMGIGLF VTGAMLKKKY ESFSAILVSG AMTIFYFVTF IAYAVFGYFP
QSLAFVLMFL FTAFTVLASL SYNQVVIAII GLVGGYAVPF LLSNNSGQVE ILFAYTAIIN
IGVLILSFYK QWRSLYISAL FLTWLLLFST WVSAYQYDDF VPYFVFNLVT FLTFYVAFIA
QKIHRVQELE AVDVLLFLFS SLSFYAMGVW LILDYYPNNR TFVAMFTLLN AVFHFLVGYY
FHLKKAPSQA LKYLVLVLAL SFATLVIPIQ FKGTWITIFW IAEAALLFGF GRTKKMPVYE
RISYAVAILA TFSLLIDWGK GSYSIFDMED ARAYITPFAN LLFITGLLYS VAVGAMAYIN
DKYKETGTLN KVLSFLFNIF SVLILYCTFY REISVFCDMR ALHQDPVIYS HYEAYQDLNT
FKGVWHIIYS VLFISAYSFL NVKYLKKKLL AELQIGLNFL LLTIFMTLGL YYFSELRERY
MEEVQEGGQL SLWFLNIRYV GLLSLVVLGN SIYALSKFLE FKTGARRVLE MLLHLVILWV
ASSELLHWTD IYESVANYKL GLTILWGGYA ILLVVLGIFK RKKYQRISGI ILVGFTLLKL
FFYDTTHLDT LHKTIVFVLL GVLLLVASFL YNKYTKEIEG EQK
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